- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.63 Å
- Oligo State
- homo-11-mer
- Ligands
- 11 x NA: SODIUM ION(Non-functional Binders)
- 11 x DMU: DECYL-BETA-D-MALTOPYRANOSIDE(Non-covalent)
DMU.2: 8 residues within 4Å:- Chain A: M.1, I.9, C.13
- Chain B: D.2, T.5, C.13
- Ligands: DMU.4, DMU.22
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:D.2, B:T.5, A:M.1
- Hydrophobic interactions: A:I.9
DMU.4: 9 residues within 4Å:- Chain B: M.1, C.13
- Chain C: M.1, D.2, T.5, I.9, C.13
- Ligands: DMU.2, DMU.6
4 PLIP interactions:3 interactions with chain C, 1 interactions with chain B- Hydrophobic interactions: C:I.9
- Hydrogen bonds: C:D.2, C:T.5, B:M.1
DMU.6: 7 residues within 4Å:- Chain D: M.1, D.2, T.5, I.9, C.13
- Ligands: DMU.4, DMU.8
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:M.1, D:D.2, D:D.2
DMU.8: 9 residues within 4Å:- Chain D: M.1, I.9
- Chain E: M.1, D.2, T.5, I.9, V.16
- Ligands: DMU.6, DMU.10
7 PLIP interactions:3 interactions with chain D, 4 interactions with chain E- Hydrophobic interactions: D:I.9, D:I.9, E:I.9, E:V.16
- Hydrogen bonds: D:M.1, E:D.2, E:D.2
DMU.10: 7 residues within 4Å:- Chain E: M.1, I.9
- Chain F: D.2, T.5, C.13
- Ligands: DMU.8, DMU.12
5 PLIP interactions:1 interactions with chain F, 4 interactions with chain E- Hydrogen bonds: F:D.2, E:M.1, E:M.1
- Hydrophobic interactions: E:I.9, E:I.9
DMU.12: 6 residues within 4Å:- Chain F: M.1
- Chain G: T.5, I.9, C.13
- Ligands: DMU.10, DMU.14
4 PLIP interactions:3 interactions with chain F, 1 interactions with chain G- Hydrogen bonds: F:M.1, F:M.1, F:D.2
- Hydrophobic interactions: G:I.9
DMU.14: 5 residues within 4Å:- Chain G: C.13
- Chain H: C.13
- Ligands: DMU.12, DMU.16, DMU.18
No protein-ligand interaction detected (PLIP)DMU.16: 7 residues within 4Å:- Chain H: M.1, D.2, T.5, C.13
- Chain I: C.13
- Ligands: DMU.14, DMU.18
3 PLIP interactions:3 interactions with chain H- Hydrogen bonds: H:M.1, H:D.2, H:D.2
DMU.18: 9 residues within 4Å:- Chain I: M.1, D.2, T.5, I.9, C.13
- Chain J: C.13
- Ligands: DMU.14, DMU.16, DMU.20
4 PLIP interactions:4 interactions with chain I- Hydrophobic interactions: I:I.9
- Hydrogen bonds: I:D.2, I:T.5, I:T.5
DMU.20: 7 residues within 4Å:- Chain J: M.1, T.5, C.13
- Chain K: T.5, I.9
- Ligands: DMU.18, DMU.22
2 PLIP interactions:1 interactions with chain J, 1 interactions with chain K- Hydrogen bonds: J:M.1, K:T.5
DMU.22: 10 residues within 4Å:- Chain A: M.1, D.2, T.5, C.13, V.16
- Chain K: M.1, T.5, I.9
- Ligands: DMU.2, DMU.20
6 PLIP interactions:3 interactions with chain A, 3 interactions with chain K- Hydrophobic interactions: A:V.16, K:I.9, K:I.9
- Hydrogen bonds: A:D.2, A:T.5, K:M.1
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schulz, S. et al., A new type of Na(+)-driven ATP synthase membrane rotor with a two-carboxylate ion-coupling motif. PLoS Biol. (2013)
- Release Date
- 2013-05-29
- Peptides
- ATP SYNTHASE SUBUNIT C: ABCDEFGHIJK
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
LB
MC
ND
OE
PF
QG
RH
SI
TJ
UK
V - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.63 Å
- Oligo State
- homo-11-mer
- Ligands
- 11 x NA: SODIUM ION(Non-functional Binders)
- 11 x DMU: DECYL-BETA-D-MALTOPYRANOSIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schulz, S. et al., A new type of Na(+)-driven ATP synthase membrane rotor with a two-carboxylate ion-coupling motif. PLoS Biol. (2013)
- Release Date
- 2013-05-29
- Peptides
- ATP SYNTHASE SUBUNIT C: ABCDEFGHIJK
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
LB
MC
ND
OE
PF
QG
RH
SI
TJ
UK
V - Membrane
-
We predict this structure to be a membrane protein.