- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.81 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x DVT: DECAVANADATE(Non-covalent)
- 13 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 4 residues within 4Å:- Chain A: G.189, G.190, S.191, S.192
Ligand excluded by PLIPCL.3: 5 residues within 4Å:- Chain A: S.43, G.190, S.191, D.233, Q.234
Ligand excluded by PLIPCL.4: 7 residues within 4Å:- Chain A: G.42, S.43, G.76, I.77, S.78, G.119, M.120
Ligand excluded by PLIPCL.5: 3 residues within 4Å:- Chain A: Y.377, P.378, T.379
Ligand excluded by PLIPCL.6: 3 residues within 4Å:- Chain A: A.206, P.207, E.208
Ligand excluded by PLIPCL.11: 5 residues within 4Å:- Chain B: G.189, G.190, S.191, S.192
- Ligands: NA.23
Ligand excluded by PLIPCL.12: 5 residues within 4Å:- Chain B: S.43, G.190, S.191, D.233, Q.234
Ligand excluded by PLIPCL.13: 7 residues within 4Å:- Chain B: G.42, S.43, G.76, I.77, S.78, G.119, M.120
Ligand excluded by PLIPCL.14: 3 residues within 4Å:- Chain B: Y.377, P.378, T.379
Ligand excluded by PLIPCL.15: 5 residues within 4Å:- Chain A: P.207
- Chain B: R.121, R.124, I.155, T.156
Ligand excluded by PLIPCL.16: 3 residues within 4Å:- Chain B: A.206, P.207, E.208
Ligand excluded by PLIPCL.17: 5 residues within 4Å:- Chain B: P.259, G.260, P.369, W.370, E.371
Ligand excluded by PLIPCL.18: 2 residues within 4Å:- Chain B: G.329, Q.412
Ligand excluded by PLIP- 4 x ACY: ACETIC ACID(Non-functional Binders)
ACY.7: 8 residues within 4Å:- Chain A: L.304, F.307, N.309, F.319, S.397, L.398, Q.401, G.402
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:F.307, A:Q.401
- Hydrogen bonds: A:N.309, A:A.318
ACY.8: 6 residues within 4Å:- Chain A: M.341, F.344, M.358, T.362, G.392, L.396
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.362
ACY.19: 8 residues within 4Å:- Chain B: L.304, F.307, N.309, A.318, F.319, S.397, Q.401, G.402
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:F.307, B:Q.401
- Hydrogen bonds: B:N.309
ACY.20: 6 residues within 4Å:- Chain B: M.341, F.344, M.358, T.362, G.392, L.396
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:F.344
- Hydrogen bonds: B:G.392
- 5 x NA: SODIUM ION(Non-functional Binders)
NA.9: 3 residues within 4Å:- Chain A: L.304, K.305, F.307
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:L.304
- Water bridges: A:N.309, A:N.309
NA.10: 5 residues within 4Å:- Chain A: C.317, A.318, Q.401, G.402, N.404
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.404, A:N.404
NA.21: 5 residues within 4Å:- Chain B: C.317, A.318, Q.401, G.402, N.404
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.318, B:N.404
NA.22: 3 residues within 4Å:- Chain B: L.304, F.307, N.309
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.309
- Water bridges: B:N.309
NA.23: 2 residues within 4Å:- Chain B: E.160
- Ligands: CL.11
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.160
- Water bridges: B:S.335
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zebisch, M. et al., Crystallographic Evidence for a Domain Motion in Rat Nucleoside Triphosphate Diphosphohydrolase (Ntpdase) 1. J.Mol.Biol. (2012)
- Release Date
- 2011-11-30
- Peptides
- ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.81 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x DVT: DECAVANADATE(Non-covalent)
- 13 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x ACY: ACETIC ACID(Non-functional Binders)
- 5 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zebisch, M. et al., Crystallographic Evidence for a Domain Motion in Rat Nucleoside Triphosphate Diphosphohydrolase (Ntpdase) 1. J.Mol.Biol. (2012)
- Release Date
- 2011-11-30
- Peptides
- ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D