SMTL ID : 4a9w.1

Flavin-containing monooxygenase from Stenotrophomonas maltophilia

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 27 residues within 4Å: Chain A: I.9, G.10, G.11, G.12, Q.13, S.14, L.32, D.33, A.34, E.35, G.40, A.41, W.42, W.46, L.49, L.51, F.52, I.97, R.98, V.99, A.127, T.128, G.129, S.174, A.331, T.332, L.333 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:W.46, A:L.49 Hydrogen bonds: A:G.11, A:G.12, A:Q.13, A:S.14, A:S.14, A:S.14, A:A.34, A:E.35, A:E.35, A:A.41, A:W.42, A:F.52, A:R.98, A:V.99, A:V.99, A:A.331, A:L.333 Water bridges: A:Q.13, A:Q.13, A:G.15, A:T.128, A:G.129, A:T.130, A:W.131 pi-Stacking: A:W.42, A:W.42, A:F.52 pi-Cation interactions: A:R.98, A:R.98 FAD.13: 26 residues within 4Å: Chain B: G.10, G.11, G.12, Q.13, S.14, L.32, D.33, A.34, E.35, G.40, A.41, W.42, W.46, L.49, L.51, F.52, I.97, R.98, V.99, A.127, T.128, G.129, S.174, A.331, T.332, L.333 30 PLIP interactions: 30 interactions with chain B Hydrophobic interactions: B:W.46, B:L.49 Hydrogen bonds: B:G.11, B:G.12, B:Q.13, B:S.14, B:S.14, B:S.14, B:D.33, B:A.34, B:E.35, B:E.35, B:A.41, B:W.42, B:F.52, B:R.98, B:V.99, B:V.99, B:L.333 Water bridges: B:Q.13, B:Q.13, B:G.15, B:D.33, B:G.40, B:T.130 pi-Stacking: B:W.42, B:W.42, B:F.52 pi-Cation interactions: B:R.98, B:R.98

20 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: R.98, R.114 Ligand excluded by PLIP SO4.3: 5 residues within 4Å: Chain A: H.44, W.131, A.153, H.154 Chain B: R.114 Ligand excluded by PLIP SO4.4: 5 residues within 4Å: Chain A: L.150, H.151, H.154 Chain B: Q.100, R.114 Ligand excluded by PLIP SO4.5: 5 residues within 4Å: Chain A: Q.100, R.101, V.112 Chain B: I.148, Q.149 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain A: P.54, W.57, R.206 Ligand excluded by PLIP SO4.7: 3 residues within 4Å: Chain A: G.323, D.324, W.325 Ligand excluded by PLIP SO4.8: 5 residues within 4Å: Chain A: Y.135, T.281, G.282, F.283, R.284 Ligand excluded by PLIP SO4.9: 2 residues within 4Å: Chain A: A.349, Y.350 Ligand excluded by PLIP SO4.10: 5 residues within 4Å: Chain A: G.170, G.171, T.192, Q.193, H.194 Ligand excluded by PLIP SO4.11: 6 residues within 4Å: Chain A: G.147, I.148, Q.149 Chain B: Q.100, R.101, V.112 Ligand excluded by PLIP SO4.12: 5 residues within 4Å: Chain A: G.172, N.173, S.174, G.282, F.283 Ligand excluded by PLIP SO4.14: 2 residues within 4Å: Chain B: R.98, R.114 Ligand excluded by PLIP SO4.15: 5 residues within 4Å: Chain A: R.114 Chain B: Q.149, L.150, H.151, H.154 Ligand excluded by PLIP SO4.16: 2 residues within 4Å: Chain B: H.50, A.74 Ligand excluded by PLIP SO4.17: 5 residues within 4Å: Chain A: R.114 Chain B: H.44, W.131, A.153, H.154 Ligand excluded by PLIP SO4.18: 2 residues within 4Å: Chain B: R.75, A.76 Ligand excluded by PLIP SO4.19: 3 residues within 4Å: Chain B: V.93, L.94, R.95 Ligand excluded by PLIP SO4.20: 4 residues within 4Å: Chain B: G.171, T.192, Q.193, H.194 Ligand excluded by PLIP SO4.21: 4 residues within 4Å: Chain B: G.172, N.173, S.174, G.282 Ligand excluded by PLIP SO4.22: 5 residues within 4Å: Chain B: Y.139, Q.140, G.141, L.142, E.143 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jensen, C.N. et al., A Flavoprotein Monooxygenase that Catalyses a Baeyer-Villiger Reaction and Thioether Oxidation Using Nadh as the Nicotinamide Cofactor. Chembiochem (2012)

Release Date

2012-04-25

Peptides

MONOOXYGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MONOOXYGENASE