SMTL ID : 4aah.1

METHANOL DEHYDROGENASE FROM METHYLOPHILUS W3A1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-2-2-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: E.171, N.255, D.297 Ligands: PQQ.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.171 CA.3: 4 residues within 4Å: Chain C: E.171, N.255, D.297 Ligands: PQQ.4 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:E.171, C:E.171

2 x PQQ: PYRROLOQUINOLINE QUINONE(Non-covalent)

PQQ.2: 20 residues within 4Å: Chain A: E.55, C.103, C.104, V.107, R.109, T.153, S.168, G.169, A.170, E.171, T.235, W.237, N.255, D.297, R.324, N.387, W.467, G.530, W.531 Ligands: CA.1 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:W.467, A:W.531 Hydrogen bonds: A:R.109, A:T.153, A:S.168, A:G.169, A:A.170, A:E.171, A:T.235, A:R.324, A:R.324, A:N.387, A:W.531 Water bridges: A:C.103, A:T.235, A:T.235 Salt bridges: A:R.109, A:R.109 pi-Stacking: A:W.237, A:W.237, A:W.237 PQQ.4: 21 residues within 4Å: Chain C: E.55, C.103, C.104, V.107, R.109, T.153, S.168, G.169, A.170, E.171, T.235, W.237, N.255, D.297, R.324, N.387, Q.388, W.467, G.530, W.531 Ligands: CA.3 19 PLIP interactions: 19 interactions with chain C Hydrophobic interactions: C:W.467, C:W.531 Hydrogen bonds: C:R.109, C:S.168, C:G.169, C:A.170, C:R.324, C:R.324, C:N.387, C:W.531 Water bridges: C:E.171, C:E.171, C:T.235, C:T.235 Salt bridges: C:R.109, C:R.109 pi-Stacking: C:W.237, C:W.237, C:W.237

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xia, Z. et al., Determination of the gene sequence and the three-dimensional structure at 2.4 angstroms resolution of methanol dehydrogenase from Methylophilus W3A1. J.Mol.Biol. (1996)

Release Date

1996-12-07

Peptides

METHANOL DEHYDROGENASE: AC
METHANOL DEHYDROGENASE: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

METHANOL DEHYDROGENASE

METHANOL DEHYDROGENASE

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