SMTL ID : 4ab0.1

X-ray crystal structure of Nicotiana alata defensin NaD1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

homo-dimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: S.35, K.36, I.37, L.38, R.39 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.35, A:I.37, A:L.38, A:R.39 Water bridges: A:K.36, A:K.36 PO4.2: 1 residues within 4Å: Chain B: S.26 2 PLIP interactions: 2 interactions with chain B Water bridges: B:K.22, B:S.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lay, F.T. et al., Dimerization of Plant Defensin Nad1 Enhances its Antifungal Activity. J.Biol.Chem. (2012)

Release Date

2012-04-25

Peptides

FLOWER-SPECIFIC DEFENSIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

FLOWER-SPECIFIC DEFENSIN

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