SMTL ID : 4are.1

Crystal structure of the collagenase Unit of collagenase G from Clostridium histolyticum at 2.19 angstrom resolution.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.428, E.429, H.432, E.460 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.428, A:H.432, A:E.460, H2O.7

1 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.2: 11 residues within 4Å: Chain A: A.182, P.183, D.184, Y.185, T.189, N.192, W.242, D.245, V.246, Y.249, Y.250 1 PLIP interactions: 1 interactions with chain A Water bridges: A:W.242

1 x FLC: CITRATE ANION(Non-covalent)

FLC.3: 10 residues within 4Å: Chain A: S.473, G.474, V.475, Y.523, E.524, M.527, W.641, D.642, S.645, K.646 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.523, A:W.641 Hydrogen bonds: A:V.475, A:V.475 Water bridges: A:Y.523, A:D.649, A:D.649 Salt bridges: A:K.646

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.4: 4 residues within 4Å: Chain A: Y.249, K.253, R.287, W.290 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Y.249, A:K.253, A:K.253, A:R.287, A:R.287, A:W.290 Water bridges: A:D.291

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eckhard, U. et al., Structural Basis for Activity Regulation and Substrate Preference of Clostridial Collagenases G, H, and T. J.Biol.Chem. (2013)

Release Date

2013-06-05

Peptides

COLLAGENASE G: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

COLLAGENASE G