SMTL ID : 4at5.1

CRYSTAL STRUCTURE OF TRKB KINASE DOMAIN IN COMPLEX WITH GW2580

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

1 x MUJ: 5-{3-methoxy-4-[(4-methoxybenzyl)oxy]benzyl}pyrimidine-2,4-diamine(Non-covalent)

MUJ.1: 16 residues within 4Å: Chain A: A.47, L.69, L.72, I.77, V.78, F.94, E.95, Y.96, M.97, G.100, F.149, N.158, L.160, G.170, D.171, F.172 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.69, A:I.77, A:V.78, A:F.94, A:F.94, A:L.160, A:D.171, A:F.172 Hydrogen bonds: A:E.95, A:M.97, A:M.97, A:G.100, A:D.171 Water bridges: A:D.101, A:D.101

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: H.99, F.105, G.162, E.163, N.164, L.165, I.297 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.162, A:L.165 Water bridges: A:N.164, A:N.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bertrand, T. et al., The Crystal Structures of Trka and Trkb Suggest Key Regions for Achieving Selective Inhibition. J.Mol.Biol. (2012)

Release Date

2012-08-22

Peptides

BDNF/NT-3 GROWTH FACTORS RECEPTOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BDNF/NT-3 GROWTH FACTORS RECEPTOR

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