SMTL ID : 4bnq.1

The structure of the Staphylococcus aureus Ham1 protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

homo-dimer

Ligands

5 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: S.8, N.9, N.10, K.13, E.40, K.52, D.67 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:S.8, A:N.9, A:N.10 Water bridges: A:N.9, A:N.10, A:K.13, A:K.13, A:E.40, A:K.52 Salt bridges: A:K.13, A:K.52 PO4.2: 3 residues within 4Å: Chain A: T.108, T.109, D.110 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.109, A:D.110 PO4.3: 6 residues within 4Å: Chain A: V.135, S.136, K.159 Chain B: V.135, S.136, K.159 12 PLIP interactions: 3 interactions with chain A, 9 interactions with chain B Hydrogen bonds: A:S.136, B:S.136, B:S.136, B:S.136 Water bridges: A:K.159, B:K.159, B:K.159, B:K.159, B:K.159, B:N.180 Salt bridges: A:K.159, B:K.159 PO4.4: 2 residues within 4Å: Chain A: E.3, T.63 No protein-ligand interaction detected (PLIP) PO4.5: 4 residues within 4Å: Chain B: S.8, N.9, K.13, K.52 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.9 Salt bridges: B:K.13, B:K.52

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 5 residues within 4Å: Chain B: T.44, F.45, E.46, E.72, K.132 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.46, B:E.72, B:K.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abergel, C., Molecular Replacement: Tricks and Treats. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-05-29

Peptides

NON-CANONICAL PURINE NTP PYROPHOSPHATASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

NON-CANONICAL PURINE NTP PYROPHOSPHATASE