SMTL ID : 4c0j.1

Crystal structure of Drosophila Miro EF hand and cGTPase domains in the apo state (Apo-MiroS)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.82 Å

Oligo State

monomer

Ligands

1 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 2 residues within 4Å: Chain A: P.373, S.374 No protein-ligand interaction detected (PLIP)

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: G.256, S.257, G.258, K.259, T.260, G.261 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.256, A:S.257, A:G.258, A:K.259, A:T.260, A:T.260, A:T.260, A:G.261 SO4.3: 2 residues within 4Å: Chain A: R.40, R.41 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.40, A:R.41 SO4.4: 6 residues within 4Å: Chain A: K.175, R.264, K.277, E.278, F.279, T.281 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.264, A:K.280, A:T.281 Water bridges: A:K.175 Salt bridges: A:K.175, A:K.277 SO4.5: 3 residues within 4Å: Chain A: I.201, K.248, R.302 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.302 Salt bridges: A:K.248, A:R.302

1 x NA: SODIUM ION(Non-functional Binders)

NA.6: 6 residues within 4Å: Chain A: D.23, D.25, D.27, L.29, N.31, E.34 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.23, A:D.25, A:N.31

1 x HSE: L-HOMOSERINE(Non-covalent)

HSE.7: 4 residues within 4Å: Chain A: Q.39, F.77, L.80, H.81 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.81 Salt bridges: A:H.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Klosowiak, J.L. et al., Structural Coupling of the EF Hand and C-Terminal Gtpase Domains in the Mitochondrial Protein Miro. Embo Rep. (2013)

Release Date

2013-10-09

Peptides

MITOCHONDRIAL RHO GTPASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

MITOCHONDRIAL RHO GTPASE

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