SMTL ID : 4cos.1

Crystal structure of the PHD-Bromo-PWWP cassette of human PRKCBP1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.175, C.178, C.194, H.198 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.175, A:C.178, A:C.194, A:H.198 ZN.2: 4 residues within 4Å: Chain A: C.11, C.14, H.31, C.34 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.11, A:C.14, A:H.31, A:C.34 ZN.3: 4 residues within 4Å: Chain A: C.23, C.26, C.47, C.50 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.23, A:C.26, A:C.47, A:C.50

2 x DIO: 1,4-DIETHYLENE DIOXIDE(Non-covalent)

DIO.4: 3 residues within 4Å: Chain A: K.185, W.189, H.231 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.231 DIO.5: 5 residues within 4Å: Chain A: A.92, F.93, V.97, H.102, N.148 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Savitsky, P. et al., Multivalent Histone and DNA Engagement by a PHD/BRD/PWWP Triple Reader Cassette Recruits ZMYND8 to K14ac-Rich Chromatin. Cell Rep (2016)

Release Date

2014-03-05

Peptides

PROTEIN KINASE C-BINDING PROTEIN 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN KINASE C-BINDING PROTEIN 1