SMTL ID : 4d7e.1 (1 other biounit)

An unprecedented NADPH domain conformation in Lysine Monooxygenase NbtG from Nocardia farcinica

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 28 residues within 4Å: Chain A: G.8, A.9, G.10, P.11, K.12, V.36, E.37, A.38, H.39, A.40, G.43, N.44, W.45, W.51, L.58, G.59, T.60, G.135, K.136, V.137, T.173, G.174, P.175, E.216, T.217, P.399, N.400, L.401 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:W.45, A:W.51, A:E.216 Hydrogen bonds: A:K.12, A:A.38, A:H.39, A:G.43, A:N.44, A:N.44, A:W.45, A:G.59, A:T.60, A:T.60, A:T.60, A:V.137, A:V.137, A:T.173, A:G.174, A:L.401 Water bridges: A:G.10, A:P.399, A:S.402 Salt bridges: A:K.12 FAD.2: 31 residues within 4Å: Chain B: V.7, G.8, G.10, P.11, K.12, V.36, E.37, A.38, H.39, A.40, G.43, N.44, W.45, W.51, L.58, G.59, T.60, G.135, K.136, V.137, T.173, G.174, P.175, Q.177, E.216, T.217, N.388, P.399, N.400, L.401, S.402 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:W.51 Hydrogen bonds: B:G.8, B:K.12, B:A.38, B:G.43, B:N.44, B:N.44, B:N.44, B:W.45, B:G.59, B:T.60, B:T.60, B:V.137, B:V.137, B:T.173, B:G.174, B:Q.177, B:N.388, B:L.401, B:S.402 Water bridges: B:E.216 Salt bridges: B:K.12 pi-Stacking: B:W.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Binda, C. et al., An Unprecedented Nadph Domain Conformation in Lysine Monooxygenase Nbtg Provides Insights Into Uncoupling of Oxygen Consumption from Substrate Hydroxylation. J.Biol.Chem. (2015)

Release Date

2015-04-01

Peptides

L-LYS MONOOXYGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

L-LYS MONOOXYGENASE

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