SMTL ID : 4df8.1

Crystal structure of the large fragment of DNA Polymerase I from Thermus aquaticus in a closed ternary complex with aminopentinyl-7-deaza-2-dATP

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.00 Å
Oligo State
monomer
Ligands
1 x 0L4: 5-(5-aminopent-1-yn-1-yl)-7-{2-deoxy-5-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine(Non-covalent)
3 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
4 x FMT: FORMIC ACID(Non-functional Binders)
2 x CL: CHLORIDE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Bergen, K. et al., Structures of KlenTaq DNA Polymerase Caught While Incorporating C5-Modified Pyrimidine and C7-Modified 7-Deazapurine Nucleoside Triphosphates. J.Am.Chem.Soc. (2012)
Release Date
2012-05-16
Peptides
DNA polymerase I, thermostable: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

DNA polymerase I, thermostable

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1jxe.1 | 3ktq.1 | 3lwl.1 | 3lwm.1 | 3m8r.1 | 3m8s.1 | 3ojs.1 | 3oju.1 | 3rr7.1 | 3rr8.1 | 3rrg.1 | 3rrh.1 | 3rtv.1 | 3sv3.1 | 3sv4.1 | 3syz.1 | 3sz2.1 | 3t3f.1 | 4c8k.1 | 4c8l.1 | 4c8m.1 | 4c8n.1 | 4c8o.1 | 4cch.1 | 4df4.1 | 4dfj.1 | 4dfk.1 | 4dfm.1 | 4dfp.1 | 4dle.1  more...