SMTL ID : 4dg8.1

Structure of PA1221, an NRPS protein containing adenylation and PCP domains

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 17 residues within 4Å: Chain A: G.284, G.285, D.286, I.287, N.307, G.308, Y.309, G.310, P.311, T.312, D.402, F.414, R.417, K.423, G.426, R.428 Ligands: BU3.2 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:D.216, A:G.285, A:G.308, A:G.310, A:T.312, A:T.312, A:D.402, A:R.417 Water bridges: A:D.216, A:I.287, A:N.307, A:N.307, A:K.423, A:K.423, A:R.428, A:R.428 Salt bridges: A:K.423, A:R.428 pi-Stacking: A:Y.309

2 x BU3: (R,R)-2,3-BUTANEDIOL(Non-covalent)

BU3.2: 11 residues within 4Å: Chain A: D.216, A.217, W.258, G.285, G.308, G.310, T.316, F.317, K.423 Ligands: AMP.1, BU3.3 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.217, A:W.258 Hydrogen bonds: A:K.423 Water bridges: A:A.217 BU3.3: 7 residues within 4Å: Chain A: S.211, P.212, F.215, A.217, W.258, T.260 Ligands: BU3.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.258 Water bridges: A:T.260

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mitchell, C.A. et al., Structure of PA1221, a Nonribosomal Peptide Synthetase Containing Adenylation and Peptidyl Carrier Protein Domains. Biochemistry (2012)

Release Date

2012-05-02

Peptides

PA1221: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PA1221

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