SMTL ID : 4dhk.5 (4 other biounits)

Crystal structure of a deoxycytidine triphosphate deaminase (dCTP deaminase) from Burkholderia thailandensis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-trimer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: I.66, V.67, D.68, N.71, F.72, D.73, S.76 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.66, A:D.68, A:D.73, A:D.73, A:S.76 EDO.2: 8 residues within 4Å: Chain A: N.125, V.126, T.127, T.138, E.140 Chain C: S.115, A.118, R.119 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.125, A:T.127 EDO.3: 7 residues within 4Å: Chain B: I.66, V.67, D.68, N.71, F.72, D.73, S.76 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:I.66, B:D.68, B:D.73, B:D.73, B:S.76 EDO.4: 8 residues within 4Å: Chain A: S.115, A.118, R.119 Chain B: N.125, V.126, T.127, T.138, E.140 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.125, B:T.127 EDO.5: 7 residues within 4Å: Chain C: I.66, V.67, D.68, N.71, F.72, D.73, S.76 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:I.66, C:D.68, C:D.73, C:D.73, C:S.76 EDO.6: 8 residues within 4Å: Chain B: S.115, A.118, R.119 Chain C: N.125, V.126, T.127, T.138, E.140 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:N.125, C:T.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Combining functional and structural genomics to sample the essential Burkholderia structome. Plos One (2013)

Release Date

2012-03-14

Peptides

Deoxycytidine triphosphate deaminase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

Deoxycytidine triphosphate deaminase

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