SMTL ID : 4dob.1

Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monochlororomethylene triphosphate: Stereoselective binding of R-isomer

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.05 Å
Oligo State
monomer
Ligands
1 x DG- DT- DC- DG- DG: G T C G G(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
3 x NA: SODIUM ION(Non-functional Binders)
5 x CL: CHLORIDE ION(Non-functional Binders)
1 x GRC: 5'-O-[(R)-{[(R)-[(R)-chloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-2'-deoxyguanosine(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wu, Y. et al., Beta,Gamma-CHF- and beta,gamma-CHCl-dGTP Diastereomers: Synthesis, Discrete (31)P NMR Signatures, and Absolute Configurations of New Stereochemical Probes for DNA Polymerases. J.Am.Chem.Soc. (2012)
Release Date
2012-06-13
Peptides
DNA polymerase beta: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

DNA polymerase beta

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1bpx.1 | 1bpy.1 | 1bpz.1 | 1mq2.1 | 1mq3.1 | 1tv9.1 | 1tva.1 | 1zjm.1 | 1zjn.1 | 1zqa.1 | 1zqb.1 | 1zqc.1 | 1zqd.1 | 1zqe.1 | 1zqf.1 | 1zqg.1 | 1zqh.1 | 1zqi.1 | 1zqj.1 | 1zqk.1 | 1zql.1 | 1zqm.1 | 1zqn.1 | 1zqo.1 | 1zqp.1 | 1zqq.1 | 1zqr.1 | 1zqs.1 | 1zqt.1 | 2fmp.1  more...