SMTL ID : 4dpy.1 (1 other biounit)

Crystal structure of Staphylococcus epidermidis S192A mevalonate diphosphate decarboxylase complexed with inhibitor DPGP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

1 x 2P0: 1-({[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}acetyl)-L-proline(Non-covalent)

2P0.1: 16 residues within 4Å: Chain A: A.19, K.22, Y.23, K.26, I.32, S.112, S.144, G.145, S.146, R.149, A.197, R.198, M.201, M.248, D.288, A.289 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:K.22 Hydrogen bonds: A:Y.23, A:Y.23, A:Y.23, A:S.112, A:G.145, A:S.146, A:S.146 Water bridges: A:A.19, A:S.146, A:R.198, A:R.198, A:A.289 Salt bridges: A:K.26, A:R.149, A:R.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barta, M.L. et al., Structural basis for nucleotide binding and reaction catalysis in mevalonate diphosphate decarboxylase. Biochemistry (2012)

Release Date

2012-07-11

Peptides

Mevalonate diphosphate decarboxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mevalonate diphosphate decarboxylase

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