SMTL ID : 4dq2.1

Structure of staphylococcus aureus biotin protein ligase in complex with biotinol-5'-amp

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x BTX: ((2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXY-TETRAHYDROFURAN-2-YL)METHYL 5-((3AS,4S,6AR)-2-OXO-HEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL)PENTYL HYDROGEN PHOSPHATE(Non-covalent)

BTX.1: 25 residues within 4Å: Chain A: S.92, T.93, Q.94, Q.115, G.118, R.119, G.120, R.121, R.124, H.125, W.126, S.127, M.136, S.137, D.179, K.186, G.189, F.190, G.207, I.208, G.209, N.211, I.223, R.226, A.227 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:W.126 Hydrogen bonds: A:Q.94, A:Q.115, A:Q.115, A:R.119, A:R.119, A:R.121, A:S.127, A:S.127, A:N.211, A:R.226, A:R.226 Water bridges: A:S.92 Salt bridges: A:R.124, A:K.186 pi-Stacking: A:W.126, A:W.126 BTX.2: 25 residues within 4Å: Chain B: S.92, T.93, Q.94, Q.115, G.118, R.119, G.120, R.121, R.124, H.125, W.126, S.127, M.136, S.137, D.179, K.186, G.189, F.190, G.207, I.208, G.209, N.211, I.223, R.226, A.227 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:W.126 Hydrogen bonds: B:Q.94, B:Q.115, B:Q.115, B:R.119, B:R.119, B:R.121, B:S.127, B:S.127, B:N.211, B:R.226, B:R.226 Water bridges: B:S.92 Salt bridges: B:R.124, B:K.186 pi-Stacking: B:W.126, B:W.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Soares da Costa, T.P. et al., Selective inhibition of biotin protein ligase from Staphylococcus aureus. J.Biol.Chem. (2012)

Release Date

2012-04-18

Peptides

Biotin-[acetyl-CoA-carboxylase] ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Biotin-[acetyl-CoA-carboxylase] ligase