SMTL ID : 4dr8.4 (3 other biounits)

Crystal structure of a peptide deformylase from Synechococcus elongatus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: Q.66, C.109, H.151, H.155 Ligands: FMT.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.109, A:H.151, A:H.155

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.2: 8 residues within 4Å: Chain A: G.61, Q.66, C.109, L.110, H.151, E.152, H.155 Ligands: ZN.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.66, A:L.110 Water bridges: A:G.61, A:E.152, A:E.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Frank, J.A. et al., Structure and function of a cyanophage-encoded peptide deformylase. ISME J (2013)

Release Date

2013-03-06

Peptides

Peptide deformylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Peptide deformylase

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