SMTL ID : 4ds7.1 (5 other biounits)

Crystal structure of yeast calmodulin bound to the C-terminal fragment of spindle pole body protein Spc110

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SR: STRONTIUM ION(Non-functional Binders)

SR.1: 5 residues within 4Å: Chain A: D.21, D.23, S.25, S.27, E.32 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.23, A:S.25, A:E.32, A:E.32, H2O.2 SR.2: 5 residues within 4Å: Chain A: D.94, N.96, D.98, L.100, E.105 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.94, A:D.98, A:L.100, A:E.105, H2O.2

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 2 residues within 4Å: Chain A: T.118, D.119 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.119, A:D.119 Water bridges: A:A.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Viswanath, S. et al., The molecular architecture of the yeast spindle pole body core determined by Bayesian integrative modeling. Mol.Biol.Cell (2017)

Release Date

2012-03-07

Peptides

Calmodulin: A
Spindle pole body component 110: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
F

Calmodulin

Spindle pole body component 110

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