SMTL ID : 4dui.1

DARPIN D1 binding to tubulin beta chain (not in complex)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.16 Å

Oligo State

monomer

Ligands

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 6 residues within 4Å: Chain A: L.89, W.112, L.119, I.122, I.152 Ligands: MRD.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:W.112, A:L.119 MPD.4: 3 residues within 4Å: Chain A: W.112, K.144, F.145 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.145

2 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)

MRD.2: 9 residues within 4Å: Chain A: M.79, S.81, L.86, L.89, D.110, T.111, W.112, L.119 Ligands: MPD.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.86 Hydrogen bonds: A:D.110 MRD.3: 6 residues within 4Å: Chain A: K.17, E.20, A.21, Q.26, E.29, L.33 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:A.21, A:E.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pecqueur, L. et al., An Anti-Tubulin Darpin Caps the Microtubule Plus-End. To be Published

Release Date

2013-02-27

Peptides

DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) D1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) D1

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