SMTL ID : 4dyo.1 (1 other biounit)

Crystal Structure of Human Aspartyl Aminopeptidase (DNPEP) in complex with Aspartic acid Hydroxamate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-12-mer

Ligands

24 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: D.274, E.312, H.450 Ligands: ZN.2, SD4.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.274, A:E.312, A:E.312, A:H.450 ZN.2: 8 residues within 4Å: Chain A: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.1, SD4.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.104, A:D.274, A:D.356, A:D.356 ZN.11: 5 residues within 4Å: Chain B: D.274, E.312, H.450 Ligands: ZN.12, SD4.14 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.274, B:E.312, B:E.312, B:H.450 ZN.12: 8 residues within 4Å: Chain B: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.11, SD4.14 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.104, B:D.274, B:D.356, B:D.356 ZN.21: 5 residues within 4Å: Chain C: D.274, E.312, H.450 Ligands: ZN.22, SD4.24 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:D.274, C:E.312, C:E.312, C:H.450 ZN.22: 8 residues within 4Å: Chain C: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.21, SD4.24 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.104, C:D.274, C:D.356, C:D.356 ZN.31: 5 residues within 4Å: Chain D: D.274, E.312, H.450 Ligands: ZN.32, SD4.34 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:D.274, D:E.312, D:E.312, D:H.450 ZN.32: 8 residues within 4Å: Chain D: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.31, SD4.34 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:H.104, D:D.274, D:D.356, D:D.356 ZN.41: 5 residues within 4Å: Chain E: D.274, E.312, H.450 Ligands: ZN.42, SD4.44 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:D.274, E:E.312, E:E.312, E:H.450 ZN.42: 8 residues within 4Å: Chain E: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.41, SD4.44 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:H.104, E:D.274, E:D.356, E:D.356 ZN.51: 5 residues within 4Å: Chain F: D.274, E.312, H.450 Ligands: ZN.52, SD4.54 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:D.274, F:E.312, F:E.312, F:H.450 ZN.52: 8 residues within 4Å: Chain F: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.51, SD4.54 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:H.104, F:D.274, F:D.356, F:D.356 ZN.61: 5 residues within 4Å: Chain G: D.274, E.312, H.450 Ligands: ZN.62, SD4.64 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:D.274, G:E.312, G:E.312, G:H.450 ZN.62: 8 residues within 4Å: Chain G: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.61, SD4.64 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:H.104, G:D.274, G:D.356, G:D.356 ZN.71: 5 residues within 4Å: Chain H: D.274, E.312, H.450 Ligands: ZN.72, SD4.74 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:D.274, H:E.312, H:E.312, H:H.450 ZN.72: 8 residues within 4Å: Chain H: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.71, SD4.74 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:H.104, H:D.274, H:D.356, H:D.356 ZN.81: 5 residues within 4Å: Chain I: D.274, E.312, H.450 Ligands: ZN.82, SD4.84 4 PLIP interactions: 4 interactions with chain I Metal complexes: I:D.274, I:E.312, I:E.312, I:H.450 ZN.82: 8 residues within 4Å: Chain I: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.81, SD4.84 4 PLIP interactions: 4 interactions with chain I Metal complexes: I:H.104, I:D.274, I:D.356, I:D.356 ZN.91: 5 residues within 4Å: Chain J: D.274, E.312, H.450 Ligands: ZN.92, SD4.94 4 PLIP interactions: 4 interactions with chain J Metal complexes: J:D.274, J:E.312, J:E.312, J:H.450 ZN.92: 8 residues within 4Å: Chain J: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.91, SD4.94 4 PLIP interactions: 4 interactions with chain J Metal complexes: J:H.104, J:D.274, J:D.356, J:D.356 ZN.101: 5 residues within 4Å: Chain K: D.274, E.312, H.450 Ligands: ZN.102, SD4.104 4 PLIP interactions: 4 interactions with chain K Metal complexes: K:D.274, K:E.312, K:E.312, K:H.450 ZN.102: 8 residues within 4Å: Chain K: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.101, SD4.104 4 PLIP interactions: 4 interactions with chain K Metal complexes: K:H.104, K:D.274, K:D.356, K:D.356 ZN.111: 5 residues within 4Å: Chain L: D.274, E.312, H.450 Ligands: ZN.112, SD4.114 4 PLIP interactions: 4 interactions with chain L Metal complexes: L:D.274, L:E.312, L:E.312, L:H.450 ZN.112: 8 residues within 4Å: Chain L: H.104, D.274, N.275, E.311, E.312, D.356 Ligands: ZN.111, SD4.114 4 PLIP interactions: 4 interactions with chain L Metal complexes: L:H.104, L:D.274, L:D.356, L:D.356

12 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain I: Q.322 Chain K: Q.322 Ligands: MG.83, MG.103 No protein-ligand interaction detected (PLIP) MG.13: 4 residues within 4Å: Chain F: Q.322 Chain J: Q.322 Ligands: MG.53, MG.93 No protein-ligand interaction detected (PLIP) MG.23: 4 residues within 4Å: Chain E: Q.322 Chain G: Q.322 Ligands: MG.43, MG.63 No protein-ligand interaction detected (PLIP) MG.33: 4 residues within 4Å: Chain H: Q.322 Chain L: Q.322 Ligands: MG.73, MG.113 No protein-ligand interaction detected (PLIP) MG.43: 4 residues within 4Å: Chain C: Q.322 Chain G: Q.322 Ligands: MG.23, MG.63 No protein-ligand interaction detected (PLIP) MG.53: 4 residues within 4Å: Chain B: Q.322 Chain J: Q.322 Ligands: MG.13, MG.93 No protein-ligand interaction detected (PLIP) MG.63: 4 residues within 4Å: Chain C: Q.322 Chain E: Q.322 Ligands: MG.23, MG.43 No protein-ligand interaction detected (PLIP) MG.73: 4 residues within 4Å: Chain D: Q.322 Chain L: Q.322 Ligands: MG.33, MG.113 No protein-ligand interaction detected (PLIP) MG.83: 4 residues within 4Å: Chain A: Q.322 Chain K: Q.322 Ligands: MG.3, MG.103 No protein-ligand interaction detected (PLIP) MG.93: 4 residues within 4Å: Chain B: Q.322 Chain F: Q.322 Ligands: MG.13, MG.53 No protein-ligand interaction detected (PLIP) MG.103: 4 residues within 4Å: Chain A: Q.322 Chain I: Q.322 Ligands: MG.3, MG.83 No protein-ligand interaction detected (PLIP) MG.113: 4 residues within 4Å: Chain D: Q.322 Chain H: Q.322 Ligands: MG.33, MG.73 No protein-ligand interaction detected (PLIP)

12 x SD4: N-hydroxy-L-asparagine(Non-covalent)

SD4.4: 16 residues within 4Å: Chain A: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Chain D: H.180 Ligands: ZN.1, ZN.2 8 PLIP interactions: 7 interactions with chain A, 1 interactions with chain D Hydrogen bonds: A:M.357, A:K.384, A:Y.391, A:G.424, A:T.425 Salt bridges: A:H.359, A:K.384, D:H.180 SD4.14: 16 residues within 4Å: Chain B: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Chain H: H.180 Ligands: ZN.11, ZN.12 9 PLIP interactions: 1 interactions with chain H, 8 interactions with chain B Salt bridges: H:H.180, B:H.359, B:K.384 Hydrogen bonds: B:M.357, B:K.384, B:G.424, B:T.425 Water bridges: B:Y.391, B:Y.391 SD4.24: 16 residues within 4Å: Chain C: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Chain L: H.180 Ligands: ZN.21, ZN.22 9 PLIP interactions: 8 interactions with chain C, 1 interactions with chain L Hydrogen bonds: C:M.357, C:K.384, C:G.424, C:T.425 Water bridges: C:Y.391, C:Y.391 Salt bridges: C:H.359, C:K.384, L:H.180 SD4.34: 16 residues within 4Å: Chain A: H.180 Chain D: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Ligands: ZN.31, ZN.32 10 PLIP interactions: 1 interactions with chain A, 9 interactions with chain D Salt bridges: A:H.180, D:H.359, D:K.384 Hydrogen bonds: D:H.104, D:M.357, D:K.384, D:G.424, D:T.425 Water bridges: D:Y.391, D:Y.391 SD4.44: 16 residues within 4Å: Chain E: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Chain K: H.180 Ligands: ZN.41, ZN.42 8 PLIP interactions: 1 interactions with chain K, 7 interactions with chain E Salt bridges: K:H.180, E:H.359, E:K.384 Hydrogen bonds: E:M.357, E:K.384, E:Y.391, E:G.424, E:T.425 SD4.54: 16 residues within 4Å: Chain F: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Chain I: H.180 Ligands: ZN.51, ZN.52 8 PLIP interactions: 7 interactions with chain F, 1 interactions with chain I Hydrogen bonds: F:M.357, F:K.384, F:Y.391, F:G.424, F:T.425 Salt bridges: F:H.359, F:K.384, I:H.180 SD4.64: 16 residues within 4Å: Chain G: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Chain J: H.180 Ligands: ZN.61, ZN.62 9 PLIP interactions: 8 interactions with chain G, 1 interactions with chain J Hydrogen bonds: G:M.357, G:K.384, G:G.424, G:T.425 Water bridges: G:Y.391, G:Y.391 Salt bridges: G:H.359, G:K.384, J:H.180 SD4.74: 16 residues within 4Å: Chain B: H.180 Chain H: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Ligands: ZN.71, ZN.72 9 PLIP interactions: 8 interactions with chain H, 1 interactions with chain B Hydrogen bonds: H:H.104, H:M.357, H:K.384, H:Y.391, H:G.424, H:T.425 Salt bridges: H:H.359, H:K.384, B:H.180 SD4.84: 16 residues within 4Å: Chain F: H.180 Chain I: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Ligands: ZN.81, ZN.82 8 PLIP interactions: 7 interactions with chain I, 1 interactions with chain F Hydrogen bonds: I:M.357, I:K.384, I:Y.391, I:G.424, I:T.425 Salt bridges: I:H.359, I:K.384, F:H.180 SD4.94: 16 residues within 4Å: Chain G: H.180 Chain J: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Ligands: ZN.91, ZN.92 8 PLIP interactions: 7 interactions with chain J, 1 interactions with chain G Hydrogen bonds: J:M.357, J:K.384, J:Y.391, J:G.424, J:T.425 Salt bridges: J:H.359, J:K.384, G:H.180 SD4.104: 16 residues within 4Å: Chain E: H.180 Chain K: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Ligands: ZN.101, ZN.102 9 PLIP interactions: 8 interactions with chain K, 1 interactions with chain E Hydrogen bonds: K:M.357, K:K.384, K:G.424, K:T.425 Water bridges: K:Y.391, K:Y.391 Salt bridges: K:H.359, K:K.384, E:H.180 SD4.114: 16 residues within 4Å: Chain C: H.180 Chain L: H.104, D.274, E.311, E.312, D.356, M.357, H.359, K.384, Y.391, G.424, T.425, M.449, H.450 Ligands: ZN.111, ZN.112 9 PLIP interactions: 8 interactions with chain L, 1 interactions with chain C Hydrogen bonds: L:M.357, L:K.384, L:G.424, L:T.425 Water bridges: L:Y.391, L:Y.391 Salt bridges: L:H.359, L:K.384, C:H.180

72 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 5 residues within 4Å: Chain A: T.77, R.78, N.79, S.80 Chain I: R.438 Ligand excluded by PLIP GOL.6: 5 residues within 4Å: Chain A: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.7: 7 residues within 4Å: Chain A: N.372, H.373, R.374, P.375, Q.413, D.414 Chain K: R.115 Ligand excluded by PLIP GOL.8: 5 residues within 4Å: Chain A: I.179, H.180, R.183 Chain D: G.133, H.450 Ligand excluded by PLIP GOL.9: 7 residues within 4Å: Chain A: Q.322, R.434 Chain I: R.434 Chain K: Q.322, R.434 Ligands: GOL.89, GOL.109 Ligand excluded by PLIP GOL.10: 5 residues within 4Å: Chain A: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.15: 5 residues within 4Å: Chain B: T.77, R.78, N.79, S.80 Chain J: R.438 Ligand excluded by PLIP GOL.16: 5 residues within 4Å: Chain B: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.17: 7 residues within 4Å: Chain B: N.372, H.373, R.374, P.375, Q.413, D.414 Chain F: R.115 Ligand excluded by PLIP GOL.18: 5 residues within 4Å: Chain B: I.179, H.180, R.183 Chain H: G.133, H.450 Ligand excluded by PLIP GOL.19: 7 residues within 4Å: Chain B: Q.322, R.434 Chain F: Q.322, R.434 Chain J: R.434 Ligands: GOL.59, GOL.99 Ligand excluded by PLIP GOL.20: 5 residues within 4Å: Chain B: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.25: 5 residues within 4Å: Chain C: T.77, R.78, N.79, S.80 Chain E: R.438 Ligand excluded by PLIP GOL.26: 5 residues within 4Å: Chain C: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.27: 7 residues within 4Å: Chain C: N.372, H.373, R.374, P.375, Q.413, D.414 Chain G: R.115 Ligand excluded by PLIP GOL.28: 5 residues within 4Å: Chain C: I.179, H.180, R.183 Chain L: G.133, H.450 Ligand excluded by PLIP GOL.29: 7 residues within 4Å: Chain C: Q.322, R.434 Chain E: R.434 Chain G: Q.322, R.434 Ligands: GOL.49, GOL.69 Ligand excluded by PLIP GOL.30: 5 residues within 4Å: Chain C: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.35: 5 residues within 4Å: Chain D: T.77, R.78, N.79, S.80 Chain L: R.438 Ligand excluded by PLIP GOL.36: 5 residues within 4Å: Chain D: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.37: 7 residues within 4Å: Chain D: N.372, H.373, R.374, P.375, Q.413, D.414 Chain H: R.115 Ligand excluded by PLIP GOL.38: 5 residues within 4Å: Chain A: G.133, H.450 Chain D: I.179, H.180, R.183 Ligand excluded by PLIP GOL.39: 7 residues within 4Å: Chain D: Q.322, R.434 Chain H: Q.322, R.434 Chain L: R.434 Ligands: GOL.79, GOL.119 Ligand excluded by PLIP GOL.40: 5 residues within 4Å: Chain D: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.45: 5 residues within 4Å: Chain E: T.77, R.78, N.79, S.80 Chain G: R.438 Ligand excluded by PLIP GOL.46: 5 residues within 4Å: Chain E: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.47: 7 residues within 4Å: Chain C: R.115 Chain E: N.372, H.373, R.374, P.375, Q.413, D.414 Ligand excluded by PLIP GOL.48: 5 residues within 4Å: Chain E: I.179, H.180, R.183 Chain K: G.133, H.450 Ligand excluded by PLIP GOL.49: 7 residues within 4Å: Chain C: Q.322, R.434 Chain E: Q.322, R.434 Chain G: R.434 Ligands: GOL.29, GOL.69 Ligand excluded by PLIP GOL.50: 5 residues within 4Å: Chain E: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.55: 5 residues within 4Å: Chain B: R.438 Chain F: T.77, R.78, N.79, S.80 Ligand excluded by PLIP GOL.56: 5 residues within 4Å: Chain F: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.57: 7 residues within 4Å: Chain F: N.372, H.373, R.374, P.375, Q.413, D.414 Chain J: R.115 Ligand excluded by PLIP GOL.58: 5 residues within 4Å: Chain F: I.179, H.180, R.183 Chain I: G.133, H.450 Ligand excluded by PLIP GOL.59: 7 residues within 4Å: Chain B: R.434 Chain F: Q.322, R.434 Chain J: Q.322, R.434 Ligands: GOL.19, GOL.99 Ligand excluded by PLIP GOL.60: 5 residues within 4Å: Chain F: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.65: 5 residues within 4Å: Chain C: R.438 Chain G: T.77, R.78, N.79, S.80 Ligand excluded by PLIP GOL.66: 5 residues within 4Å: Chain G: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.67: 7 residues within 4Å: Chain E: R.115 Chain G: N.372, H.373, R.374, P.375, Q.413, D.414 Ligand excluded by PLIP GOL.68: 5 residues within 4Å: Chain G: I.179, H.180, R.183 Chain J: G.133, H.450 Ligand excluded by PLIP GOL.69: 7 residues within 4Å: Chain C: R.434 Chain E: Q.322, R.434 Chain G: Q.322, R.434 Ligands: GOL.29, GOL.49 Ligand excluded by PLIP GOL.70: 5 residues within 4Å: Chain G: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.75: 5 residues within 4Å: Chain D: R.438 Chain H: T.77, R.78, N.79, S.80 Ligand excluded by PLIP GOL.76: 5 residues within 4Å: Chain H: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.77: 7 residues within 4Å: Chain H: N.372, H.373, R.374, P.375, Q.413, D.414 Chain L: R.115 Ligand excluded by PLIP GOL.78: 5 residues within 4Å: Chain B: G.133, H.450 Chain H: I.179, H.180, R.183 Ligand excluded by PLIP GOL.79: 7 residues within 4Å: Chain D: R.434 Chain H: Q.322, R.434 Chain L: Q.322, R.434 Ligands: GOL.39, GOL.119 Ligand excluded by PLIP GOL.80: 5 residues within 4Å: Chain H: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.85: 5 residues within 4Å: Chain I: T.77, R.78, N.79, S.80 Chain K: R.438 Ligand excluded by PLIP GOL.86: 5 residues within 4Å: Chain I: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.87: 7 residues within 4Å: Chain A: R.115 Chain I: N.372, H.373, R.374, P.375, Q.413, D.414 Ligand excluded by PLIP GOL.88: 5 residues within 4Å: Chain F: G.133, H.450 Chain I: I.179, H.180, R.183 Ligand excluded by PLIP GOL.89: 7 residues within 4Å: Chain A: Q.322, R.434 Chain I: Q.322, R.434 Chain K: R.434 Ligands: GOL.9, GOL.109 Ligand excluded by PLIP GOL.90: 5 residues within 4Å: Chain I: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.95: 5 residues within 4Å: Chain F: R.438 Chain J: T.77, R.78, N.79, S.80 Ligand excluded by PLIP GOL.96: 5 residues within 4Å: Chain J: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.97: 7 residues within 4Å: Chain B: R.115 Chain J: N.372, H.373, R.374, P.375, Q.413, D.414 Ligand excluded by PLIP GOL.98: 5 residues within 4Å: Chain G: G.133, H.450 Chain J: I.179, H.180, R.183 Ligand excluded by PLIP GOL.99: 7 residues within 4Å: Chain B: Q.322, R.434 Chain F: R.434 Chain J: Q.322, R.434 Ligands: GOL.19, GOL.59 Ligand excluded by PLIP GOL.100: 5 residues within 4Å: Chain J: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.105: 5 residues within 4Å: Chain A: R.438 Chain K: T.77, R.78, N.79, S.80 Ligand excluded by PLIP GOL.106: 5 residues within 4Å: Chain K: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.107: 7 residues within 4Å: Chain I: R.115 Chain K: N.372, H.373, R.374, P.375, Q.413, D.414 Ligand excluded by PLIP GOL.108: 5 residues within 4Å: Chain E: G.133, H.450 Chain K: I.179, H.180, R.183 Ligand excluded by PLIP GOL.109: 7 residues within 4Å: Chain A: R.434 Chain I: Q.322, R.434 Chain K: Q.322, R.434 Ligands: GOL.9, GOL.89 Ligand excluded by PLIP GOL.110: 5 residues within 4Å: Chain K: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP GOL.115: 5 residues within 4Å: Chain H: R.438 Chain L: T.77, R.78, N.79, S.80 Ligand excluded by PLIP GOL.116: 5 residues within 4Å: Chain L: P.363, N.364, Y.365, L.366, D.367 Ligand excluded by PLIP GOL.117: 7 residues within 4Å: Chain D: R.115 Chain L: N.372, H.373, R.374, P.375, Q.413, D.414 Ligand excluded by PLIP GOL.118: 5 residues within 4Å: Chain C: G.133, H.450 Chain L: I.179, H.180, R.183 Ligand excluded by PLIP GOL.119: 7 residues within 4Å: Chain D: Q.322, R.434 Chain H: R.434 Chain L: Q.322, R.434 Ligands: GOL.39, GOL.79 Ligand excluded by PLIP GOL.120: 5 residues within 4Å: Chain L: D.367, K.368, R.418, D.420, T.421 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chaikuad, A. et al., Structure of human aspartyl aminopeptidase complexed with substrate analogue: insight into catalytic mechanism, substrate specificity and M18 peptidase family. Bmc Struct.Biol. (2012)

Release Date

2012-03-14

Peptides

Aspartyl aminopeptidase: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

Aspartyl aminopeptidase

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