SMTL ID : 4e0v.1

Structure of L-amino acid oxidase from the B. jararacussu venom

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 31 residues within 4Å: Chain A: G.53, A.54, G.55, M.56, S.57, L.75, E.76, A.77, S.78, R.80, A.81, G.82, G.83, Q.84, V.85, G.100, P.101, M.102, R.103, L.104, L.270, C.306, T.307, W.433, G.442, G.469, E.470, G.477, W.478, I.479, T.482 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:A.54, A:M.56, A:S.57, A:E.76, A:E.76, A:E.76, A:A.77, A:S.78, A:R.80, A:R.80, A:G.83, A:Q.84, A:Q.84, A:M.102, A:R.103, A:R.103, A:C.306, A:E.470, A:W.478, A:W.478, A:I.479, A:T.482 FAD.2: 37 residues within 4Å: Chain B: V.52, G.53, A.54, G.55, M.56, S.57, L.75, E.76, A.77, S.78, G.82, G.83, Q.84, V.85, G.100, P.101, M.102, R.103, L.104, A.272, R.273, V.274, T.307, T.308, A.311, I.315, K.339, Y.385, W.433, Y.438, I.443, G.469, E.470, G.477, W.478, I.479, T.482 24 PLIP interactions: 24 interactions with chain B Hydrophobic interactions: B:P.101, B:W.478, B:W.478, B:I.479 Hydrogen bonds: B:A.54, B:G.55, B:M.56, B:S.57, B:G.58, B:A.77, B:S.78, B:G.82, B:Q.84, B:Q.84, B:M.102, B:R.273, B:V.274, B:V.274, B:K.339, B:Y.385, B:W.433, B:E.470, B:E.470, B:T.482

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ullah, A. et al., Structural insights into selectivity and cofactor binding in snake venom L-amino acid oxidases. Biochem.Biophys.Res.Commun. (2012)

Release Date

2012-04-25

Peptides

L-amino-acid oxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

L-amino-acid oxidase