- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x KAI: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE(Non-covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: R.20, S.22
- Chain D: K.147, W.158
3 PLIP interactions:3 interactions with chain A- Water bridges: A:D.23, A:D.23
- Salt bridges: A:R.20
SO4.3: 3 residues within 4Å:- Chain A: R.31, V.53, K.54
8 PLIP interactions:8 interactions with chain A- Water bridges: A:R.31, A:R.31, A:R.31, A:R.31, A:R.31, A:R.31
- Salt bridges: A:R.31, A:K.54
SO4.7: 3 residues within 4Å:- Chain B: R.20, S.22, K.24
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:S.22
- Salt bridges: B:R.20, B:K.24
SO4.8: 3 residues within 4Å:- Chain B: R.31, V.53, K.54
5 PLIP interactions:5 interactions with chain B- Water bridges: B:R.31, B:R.31, B:R.31
- Salt bridges: B:R.31, B:K.54
SO4.9: 3 residues within 4Å:- Chain B: R.4, H.80, P.225
1 PLIP interactions:1 interactions with chain B- Salt bridges: B:H.80
SO4.10: 1 residues within 4Å:- Chain B: K.171
4 PLIP interactions:4 interactions with chain B- Water bridges: B:K.60, B:K.171
- Salt bridges: B:K.60, B:K.171
SO4.13: 4 residues within 4Å:- Chain B: K.147, W.158
- Chain C: R.20, S.22
3 PLIP interactions:3 interactions with chain C- Water bridges: C:D.23, C:D.23
- Salt bridges: C:R.20
SO4.14: 3 residues within 4Å:- Chain C: R.31, V.53, K.54
8 PLIP interactions:8 interactions with chain C- Water bridges: C:R.31, C:R.31, C:R.31, C:R.31, C:R.31, C:R.31
- Salt bridges: C:R.31, C:K.54
SO4.18: 3 residues within 4Å:- Chain D: R.20, S.22, K.24
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:S.22
- Salt bridges: D:R.20, D:K.24
SO4.19: 3 residues within 4Å:- Chain D: R.31, V.53, K.54
5 PLIP interactions:5 interactions with chain D- Water bridges: D:R.31, D:R.31, D:R.31
- Salt bridges: D:R.31, D:K.54
SO4.20: 3 residues within 4Å:- Chain D: R.4, H.80, P.225
3 PLIP interactions:3 interactions with chain D- Water bridges: D:D.83, D:D.83
- Salt bridges: D:H.80
SO4.21: 1 residues within 4Å:- Chain D: K.171
4 PLIP interactions:4 interactions with chain D- Water bridges: D:K.60, D:K.171
- Salt bridges: D:K.60, D:K.171
- 6 x CL: CHLORIDE ION(Non-functional Binders)
CL.4: 1 residues within 4Å:- Chain A: W.158
Ligand excluded by PLIPCL.5: 3 residues within 4Å:- Chain A: K.103
- Chain B: K.103, R.227
Ligand excluded by PLIPCL.11: 1 residues within 4Å:- Chain B: N.203
Ligand excluded by PLIPCL.15: 1 residues within 4Å:- Chain C: W.158
Ligand excluded by PLIPCL.16: 3 residues within 4Å:- Chain C: K.103
- Chain D: K.103, R.227
Ligand excluded by PLIPCL.22: 1 residues within 4Å:- Chain D: N.203
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Venskutonyte, R. et al., Kainate induces various domain closures in AMPA and kainate receptors. Neurochem Int (2012)
- Release Date
- 2012-04-25
- Peptides
- Glutamate receptor, ionotropic kainate 1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x KAI: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE(Non-covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 6 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Venskutonyte, R. et al., Kainate induces various domain closures in AMPA and kainate receptors. Neurochem Int (2012)
- Release Date
- 2012-04-25
- Peptides
- Glutamate receptor, ionotropic kainate 1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B