SMTL ID : 4ecl.1 (1 other biounit)

Crystal structure of the cytoplasmic domain of vancomycin resistance serine racemase VanTg

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

homo-dimer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: K.125, M.130, R.132, L.133 Chain B: Q.316 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: A.164, S.203, G.206 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain A: Q.316 Chain B: K.125, M.130, R.132, L.133 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain B: L.161, A.164, S.203, G.206 Ligand excluded by PLIP

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 8 residues within 4Å: Chain A: Y.42, S.203, S.204, R.219, V.220, G.221, V.222, N.358 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:Y.42, A:S.203, A:S.204, A:G.221, A:V.222 Water bridges: A:Y.42, A:Y.42, A:Y.205, A:N.358 SO4.6: 7 residues within 4Å: Chain B: Y.42, S.203, S.204, R.219, G.221, V.222, N.358 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:Y.42, B:Y.42, B:S.203, B:S.204, B:S.204, B:G.221, B:V.222, B:N.358 Water bridges: B:Y.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Meziane-Cherif, D. et al., Structural and Functional Adaptation of Vancomycin Resistance VanT Serine Racemases. MBio (2015)

Release Date

2012-04-18

Peptides

Serine racemase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine racemase

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