- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x PN4: (2R)-2,4-dihydroxy-3,3-dimethyl-N-[3-oxo-3-(pentylamino)propyl]butanamide(Non-covalent)
PN4.2: 10 residues within 4Å:- Chain A: V.115, D.145, K.163, G.164, Y.198, Y.258, F.262, F.277, I.299, N.300
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:Y.198, A:Y.258, A:F.262, A:F.277, A:F.277, A:I.299
- Hydrogen bonds: A:Y.198, A:Y.198, A:N.300, A:N.300
- Water bridges: A:D.145
PN4.4: 15 residues within 4Å:- Chain B: V.115, D.145, K.163, G.164, H.195, Y.198, L.219, Y.258, Y.276, F.277, Y.280, L.295, I.299, N.300
- Ligands: UNX.11
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:Y.198, B:Y.198, B:Y.276, B:F.277, B:Y.280, B:L.295, B:I.299
- Hydrogen bonds: B:H.195, B:Y.198, B:Y.258, B:N.300, B:N.300
- Water bridges: B:K.119, B:D.145, B:D.145, B:H.195, B:R.261
- 7 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
UNX.5: 1 residues within 4Å:- Chain B: S.316
No protein-ligand interaction detected (PLIP)UNX.6: 1 residues within 4Å:- Ligands: UNX.7
No protein-ligand interaction detected (PLIP)UNX.7: 4 residues within 4Å:- Chain B: Y.83, D.242, F.243
- Ligands: UNX.6
No protein-ligand interaction detected (PLIP)UNX.8: 3 residues within 4Å:- Chain B: K.58, S.65, L.66
No protein-ligand interaction detected (PLIP)UNX.9: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)UNX.10: 3 residues within 4Å:- Chain B: N.81, S.85, E.135
No protein-ligand interaction detected (PLIP)UNX.11: 4 residues within 4Å:- Chain B: K.119, D.145, E.217
- Ligands: PN4.4
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, B. et al., Crystal structures of Klebsiella pneumoniae pantothenate kinase in complex with N-substituted pantothenamides. Proteins (2013)
- Release Date
- 2013-04-10
- Peptides
- Pantothenate kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x PN4: (2R)-2,4-dihydroxy-3,3-dimethyl-N-[3-oxo-3-(pentylamino)propyl]butanamide(Non-covalent)
- 7 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, B. et al., Crystal structures of Klebsiella pneumoniae pantothenate kinase in complex with N-substituted pantothenamides. Proteins (2013)
- Release Date
- 2013-04-10
- Peptides
- Pantothenate kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
F