SMTL ID : 4f9n.1

Crystal structure of the complex of type I Ribosome inactivating protein from Momordica balsamina with N7-methylated guanine at 2.65 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 3 residues within 4Å: Chain A: T.226, N.227, T.229 No protein-ligand interaction detected (PLIP)

1 x MY6: 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one(Non-covalent)

MY6.2: 11 residues within 4Å: Chain A: Y.70, I.71, M.72, F.83, E.85, G.109, N.110, Y.111, I.155, E.160, R.163 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:I.71, A:I.71, A:I.71 Water bridges: A:Y.111 Salt bridges: A:E.85 pi-Stacking: A:Y.70, A:Y.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamini, S. et al., Crystal structure of the complex of type I Ribosome inactivating protein from Momordica balsamina with N7-methylated guanine at 2.65 A resolution. To be Published

Release Date

2012-06-20

Peptides

Ribosome inactivating protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosome inactivating protein

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