SMTL ID : 4fbk.1

Crystal structure of a covalently fused Nbs1-Mre11 complex with one manganese ion per active site

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: D.124, I.125, F.126, H.190, G.191, H.193, L.205 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.124, A:I.125, A:F.126, A:G.191 Water bridges: A:H.190, A:L.205 Salt bridges: A:H.190, A:H.193 SO4.2: 4 residues within 4Å: Chain A: K.130, G.198 Chain B: S.132, R.133 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:G.198, B:R.133 Salt bridges: A:K.130, B:R.133 Water bridges: B:K.134 SO4.3: 3 residues within 4Å: Chain A: S.132, R.133 Chain B: K.130 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.133 Water bridges: A:K.134 Salt bridges: A:R.133, B:K.130 SO4.5: 7 residues within 4Å: Chain B: D.124, I.125, F.126, H.190, G.191, H.193, L.205 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:D.124, B:I.125, B:F.126, B:G.191 Water bridges: B:L.205 Salt bridges: B:H.190, B:H.193

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.4: 5 residues within 4Å: Chain A: D.84, H.86, D.124, H.309, H.311 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.84, A:D.124, A:H.311 MN.6: 6 residues within 4Å: Chain B: D.84, H.86, D.124, H.281, H.309, H.311 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.84, B:D.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schiller, C.B. et al., Structure of Mre11-Nbs1 complex yields insights into ataxia-telangiectasia-like disease mutations and DNA damage signaling. Nat.Struct.Mol.Biol. (2012)

Release Date

2012-06-20

Peptides

DNA repair and telomere maintenance protein nbs1,DNA repair protein rad32 CHIMERIC PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA repair and telomere maintenance protein nbs1,DNA repair protein rad32 CHIMERIC PROTEIN

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