SMTL ID : 4fix.1 (1 other biounit)

Crystal Structure of GlfT2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-tetramer

Ligands

12 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: R.31, I.33, R.63, D.205, E.282, P.283, D.284 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.282, A:D.284 GOL.2: 8 residues within 4Å: Chain A: E.50, S.51, T.52, N.54, A.55, R.56, R.57 Chain C: T.53 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.50, A:A.55 Water bridges: A:N.54 GOL.3: 5 residues within 4Å: Chain A: L.464, A.468, L.545, N.552, W.575 No protein-ligand interaction detected (PLIP) GOL.5: 7 residues within 4Å: Chain B: R.31, I.33, R.63, D.205, E.282, P.283, D.284 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.282, B:D.284 GOL.6: 8 residues within 4Å: Chain B: E.50, S.51, T.52, N.54, A.55, R.56, R.57 Chain D: T.53 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.50, B:A.55 Water bridges: B:N.54 GOL.7: 5 residues within 4Å: Chain B: L.464, A.468, L.545, N.552, W.575 No protein-ligand interaction detected (PLIP) GOL.9: 7 residues within 4Å: Chain C: R.31, I.33, R.63, D.205, E.282, P.283, D.284 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.282, C:D.284 GOL.10: 8 residues within 4Å: Chain B: T.53 Chain C: E.50, S.51, T.52, N.54, A.55, R.56, R.57 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:E.50, C:A.55 Water bridges: C:N.54 GOL.11: 5 residues within 4Å: Chain C: L.464, A.468, L.545, N.552, W.575 No protein-ligand interaction detected (PLIP) GOL.13: 7 residues within 4Å: Chain D: R.31, I.33, R.63, D.205, E.282, P.283, D.284 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:E.282, D:D.284 GOL.14: 8 residues within 4Å: Chain A: T.53 Chain D: E.50, S.51, T.52, N.54, A.55, R.56, R.57 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:E.50, D:A.55 Water bridges: D:N.54 GOL.15: 5 residues within 4Å: Chain D: L.464, A.468, L.545, N.552, W.575 No protein-ligand interaction detected (PLIP)

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.4: 3 residues within 4Å: Chain A: D.276, D.278, H.416 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.276, A:D.278, A:D.278, A:H.416 MN.8: 3 residues within 4Å: Chain B: D.276, D.278, H.416 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.276, B:D.278, B:D.278, B:H.416 MN.12: 3 residues within 4Å: Chain C: D.276, D.278, H.416 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:D.276, C:D.278, C:D.278, C:H.416 MN.16: 3 residues within 4Å: Chain D: D.276, D.278, H.416 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:D.276, D:D.278, D:D.278, D:H.416

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wheatley, R.W. et al., Tetrameric Structure of the GlfT2 Galactofuranosyltransferase Reveals a Scaffold for the Assembly of Mycobacterial Arabinogalactan. J.Biol.Chem. (2012)

Release Date

2012-06-20

Peptides

UDP-galactofuranosyl transferase GlfT2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

UDP-galactofuranosyl transferase GlfT2

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