SMTL ID : 4fjo.2 (2 other biounits)

Structure of the Rev1 CTD-Rev3/7-Pol kappa RIR complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

monomer

Ligands

8 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 3 residues within 4Å: Chain A: E.81, K.82, H.151 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.81, A:E.81 Salt bridges: A:K.82, A:H.151 PO4.2: 2 residues within 4Å: Chain A: H.180, M.181 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:M.181 Salt bridges: A:H.180 PO4.3: 5 residues within 4Å: Chain A: H.118, V.119, S.194, D.195, I.196 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.119, A:D.195, A:D.195 Salt bridges: A:H.118 PO4.4: 3 residues within 4Å: Chain A: H.182, D.183 Ligands: PO4.7 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.183, A:D.183 Salt bridges: A:H.182 PO4.5: 5 residues within 4Å: Chain A: Y.32, V.33, E.35, V.39, D.134 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.35, A:E.35, A:E.35 PO4.6: 3 residues within 4Å: Chain A: N.10, E.76, K.77 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.10, A:E.76 Water bridges: A:Q.13, A:K.77, A:K.77 Salt bridges: A:K.77 PO4.7: 3 residues within 4Å: Chain A: H.180, H.182 Ligands: PO4.4 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:H.180, A:H.182 PO4.8: 3 residues within 4Å: Chain A: K.129, P.188, L.189 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.188, A:L.189 Salt bridges: A:K.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wojtaszek, J. et al., Structural basis of Rev1-mediated assembly of a quaternary vertebrate translesion polymerase complex consisting of Rev1, heterodimeric Pol zeta and Pol kappa. J.Biol.Chem. (2012)

Release Date

2012-08-08

Peptides

Mitotic spindle assembly checkpoint protein MAD2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Mitotic spindle assembly checkpoint protein MAD2B