SMTL ID : 4g1k.2 (1 other biounit)

Crystal structure of triosephosphate isomerase from Burkholderia thailandensis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: F.244, Q.246, I.249 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.249 NA.5: 3 residues within 4Å: Chain B: F.244, Q.246, I.249 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:F.244

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: G.145, L.146, T.147, R.186 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.145, A:R.186 Water bridges: A:R.186 EDO.3: 5 residues within 4Å: Chain A: G.38, G.42, N.43, L.46, L.259 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.39, A:G.42 Water bridges: A:G.38 EDO.4: 4 residues within 4Å: Chain A: R.29, S.85, Y.115, T.147 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.29, A:R.29, A:S.85, A:T.147 Water bridges: A:T.147 EDO.6: 5 residues within 4Å: Chain B: L.142, G.145, L.146, T.147, R.186 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.146, B:R.186 EDO.8: 6 residues within 4Å: Chain B: H.37, G.38, G.42, N.43, L.46, L.259 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.43 Water bridges: B:L.46

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.7: 4 residues within 4Å: Chain B: G.233, S.234, G.255, G.256 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:G.233, B:G.255, B:G.256 Water bridges: B:K.35, B:V.235, B:V.235, B:V.235 Salt bridges: B:K.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Combining functional and structural genomics to sample the essential Burkholderia structome. Plos One (2013)

Release Date

2012-07-25

Peptides

Triosephosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Triosephosphate isomerase

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