SMTL ID : 4gdj.2 (3 other biounits)

A subtype N10 neuraminidase-like protein of A/little yellow-shouldered bat/Guatemala/060/2010

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NAG- FUL- NAG- FUC: beta-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-FUL-NAG-FUC.1: 6 residues within 4Å: Chain A: N.191, T.192, T.193, G.194, I.195, I.235 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.195 Hydrogen bonds: A:I.235

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain A: L.109, Q.180, N.181, Q.185 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Q.180 Hydrogen bonds: A:N.181 NAG.3: 2 residues within 4Å: Chain A: N.168, N.170 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.170

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 8 residues within 4Å: Chain A: N.215, L.216, D.219, A.220, D.245, G.263, G.265, G.266 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:N.215, A:D.219, A:D.245, A:G.263, A:G.265, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, X. et al., Crystal structures of two subtype N10 neuraminidase-like proteins from bat influenza A viruses reveal a diverged putative active site. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-09-26

Peptides

Neuraminidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Neuraminidase

Related Entries With Identical Sequence