SMTL ID : 4gri.1 (1 other biounit)

Crystal structure of a glutamyl-tRNA synthetase GluRS from Borrelia burgdorferi bound to glutamic acid and zinc

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.128, Y.129, C.130, Y.151, C.155 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.128, A:C.130, A:Y.151, A:C.155

1 x GLU: GLUTAMIC ACID(Non-covalent)

GLU.2: 9 residues within 4Å: Chain A: R.28, A.30, P.31, S.32, E.64, Y.217, N.221, R.235, W.239 11 PLIP interactions: 10 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:Y.217, A:W.239 Hydrogen bonds: A:S.32, A:S.32, A:S.32, A:Y.217, A:N.221, E.2 Water bridges: A:S.32 Salt bridges: A:R.28, A:R.235

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: G.93, P.94, V.95, V.96 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moen, S.O. et al., Ligand co-crystallization of aminoacyl-tRNA synthetases from infectious disease organisms. Sci Rep (2017)

Release Date

2012-09-05

Peptides

Glutamate--tRNA ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glutamate--tRNA ligase

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