SMTL ID : 4h4c.1 (1 other biounit)

IspH in complex with (E)-4-fluoro-3-methylbut-2-enyl diphosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 10 residues within 4Å: Chain A: C.20, G.22, V.23, C.104, L.106, T.175, C.205, Y.206, T.208 Ligands: 10D.2 3 PLIP interactions: 3 interactions with chain A, Metal complexes: A:C.20, A:C.104, A:C.205

1 x 10D: (2E)-4-fluoro-3-methylbut-2-en-1-yl trihydrogen diphosphate(Non-covalent)

10D.2: 14 residues within 4Å: Chain A: V.23, V.48, H.49, A.81, H.82, H.132, T.175, T.176, N.232, S.233, S.234, N.235, S.277 Ligands: SF4.1 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:T.176 Hydrogen bonds: A:H.49, A:H.49, A:T.176, A:T.176, A:T.176, A:S.234, A:N.235, A:N.235, A:S.277 Salt bridges: A:H.49, A:H.49, A:H.82, A:H.82, A:H.132 Halogen bonds: A:A.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Span, I. et al., Structures of Fluoro, Amino, and Thiol Inhibitors Bound to the [Fe(4) S(4) ] Protein IspH. Angew.Chem.Int.Ed.Engl. (2013)

Release Date

2013-01-23

Peptides

4-hydroxy-3-methylbut-2-enyl diphosphate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

4-hydroxy-3-methylbut-2-enyl diphosphate reductase

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