SMTL ID : 4h6d.1 (3 other biounits)

Crystal structure of PLP-soaked HMP synthase Thi5 from S. cerevisiae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

1 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 11 residues within 4Å: Chain B: N.11, W.12, Y.17, P.45, K.62, H.66, V.114, G.115, E.116, F.117, G.118 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:P.45, B:K.62, B:V.114 Hydrogen bonds: B:N.11, B:K.62, B:G.115, B:E.116, B:F.117, B:G.118 Salt bridges: B:H.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Coquille, S. et al., The Last Piece in the Vitamin B1 Biosynthesis Puzzle: STRUCTURAL AND FUNCTIONAL INSIGHT INTO YEAST 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE PHOSPHATE (HMP-P) SYNTHASE. J.Biol.Chem. (2012)

Release Date

2012-10-17

Peptides

Pyrimidine precursor biosynthesis enzyme THI5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
A

Pyrimidine precursor biosynthesis enzyme THI5

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