SMTL ID : 4hej.1

Discovery of Selective and Potent Inhibitors of Gram-positive Bacterial Thymidylate Kinase (TMK): Compund 16

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

1 x 14D: 5-methyl-1-[(3S)-1-{3-[3-(trifluoromethyl)phenoxy]benzyl}piperidin-3-yl]pyrimidine-2,4(1H,3H)-dione(Non-covalent)

14D.1: 15 residues within 4Å: Chain A: E.37, G.44, I.47, R.48, V.51, L.52, L.65, F.66, S.69, R.70, R.92, S.96, S.97, Y.100, Q.101 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:R.48, A:L.52, A:F.66, A:F.66, A:F.66, A:R.92, A:Y.100 Hydrogen bonds: A:R.70, A:R.70, A:Q.101, A:Q.101 pi-Stacking: A:F.66 Halogen bonds: A:G.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martinez-Botella, G. et al., Discovery of Selective and Potent Inhibitors of Gram-Positive Bacterial Thymidylate Kinase (TMK). J.Med.Chem. (2012)

Release Date

2012-10-24

Peptides

Thymidylate kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Thymidylate kinase

Related Entries With Identical Sequence