SMTL ID : 4hhf.1

Crystal Structure of chemically synthesized scorpion alpha-toxin OD1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 3 residues within 4Å: Chain A: E.55, V.56 Ligands: MPD.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.55, A:V.56 MPD.2: 4 residues within 4Å: Chain A: K.29, N.30 Ligands: MPD.1, MPD.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.30 MPD.3: 9 residues within 4Å: Chain A: I.7, A.8, D.9, D.10, Y.15, N.30, V.56, P.57 Ligands: MPD.2 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.7, A:D.9, A:V.56 Hydrogen bonds: A:Y.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Durek, T. et al., Chemical engineering and structural and pharmacological characterization of the alpha-scorpion toxin OD1. Acs Chem.Biol. (2013)

Release Date

2013-04-24

Peptides

Alpha-toxin OD1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-toxin OD1