SMTL ID : 4hpy.1

Crystal structure of RV144-elicited antibody CH59 in complex with V2 peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: A.144, F.173, T.190 Chain B: S.117, V.118, T.119, L.138, I.139, S.140 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.117, B:S.117, B:T.119, B:L.138 GOL.2: 8 residues within 4Å: Chain B: E.83, T.107, V.108, L.109, G.110, Q.111, Y.143, N.173 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:E.83, B:Q.111, B:Y.143 Water bridges: B:N.173

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liao, H.X. et al., Vaccine Induction of Antibodies against a Structurally Heterogeneous Site of Immune Pressure within HIV-1 Envelope Protein Variable Regions 1 and 2. Immunity (2013)

Release Date

2013-02-06

Peptides

CH59 Fab heavy chain: A
CH59 Fab light chain: B
Envelope glycoprotein gp160: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
P

CH59 Fab heavy chain

CH59 Fab light chain

Envelope glycoprotein gp160

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