SMTL ID : 4hym.1 (1 other biounit)

Pyrrolopyrimidine inhibitors of dna gyrase b and topoisomerase iv, part i: structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x CJC: 7-({4-[(3R)-3-aminopyrrolidin-1-yl]-5-chloro-6-ethyl-7H-pyrrolo[2,3-d]pyrimidin-2-yl}sulfanyl)pyrido[2,3-b]pyrazin-2(1H)-one(Non-covalent)

CJC.1: 15 residues within 4Å: Chain A: I.38, N.41, S.42, E.45, V.66, D.68, R.71, G.72, M.73, P.74, I.89, V.115, R.131, T.162, I.164 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.38, A:I.89, A:T.162, A:I.164 Hydrogen bonds: A:N.41, A:D.68, A:R.131 Water bridges: A:E.45, A:E.45, A:R.131, A:T.162, A:T.162 pi-Cation interactions: A:R.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tari, L.W. et al., Pyrrolopyrimidine inhibitors of DNA gyrase B (GyrB) and topoisomerase IV (ParE). Part I: Structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-02-13

Peptides

Topoisomerase IV, subunit B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Topoisomerase IV, subunit B

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