- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 34 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 5 residues within 4Å:- Chain A: Q.321, A.322, A.355, K.356, I.357
Ligand excluded by PLIPEDO.3: 8 residues within 4Å:- Chain A: E.169, L.172, E.173, F.177, P.178, G.180, V.181, F.182
Ligand excluded by PLIPEDO.4: 10 residues within 4Å:- Chain A: P.145, A.146, A.149, N.151, G.443, I.444, R.445, T.446, F.447, V.448
Ligand excluded by PLIPEDO.5: 5 residues within 4Å:- Chain A: L.312, R.338, A.339, G.340, Y.341
Ligand excluded by PLIPEDO.6: 4 residues within 4Å:- Chain A: P.24, S.190, Q.191
- Ligands: EDO.12
Ligand excluded by PLIPEDO.7: 7 residues within 4Å:- Chain A: D.314, I.315, Q.318, E.361, L.362, F.363
- Ligands: EDO.13
Ligand excluded by PLIPEDO.8: 4 residues within 4Å:- Chain A: K.33, E.36, A.37, E.179
Ligand excluded by PLIPEDO.9: 6 residues within 4Å:- Chain A: P.226, T.227, Y.435
- Chain B: P.226, T.227, Y.435
Ligand excluded by PLIPEDO.10: 2 residues within 4Å:- Chain A: D.374, D.376
Ligand excluded by PLIPEDO.11: 8 residues within 4Å:- Chain A: S.209, E.210, P.211, L.231, G.232, E.361, F.387
- Ligands: NDP.1
Ligand excluded by PLIPEDO.12: 3 residues within 4Å:- Chain A: P.24, Q.194
- Ligands: EDO.6
Ligand excluded by PLIPEDO.13: 5 residues within 4Å:- Chain A: I.311, E.361, F.363
- Ligands: NDP.1, EDO.7
Ligand excluded by PLIPEDO.14: 2 residues within 4Å:- Chain A: Q.222
- Chain B: P.211
Ligand excluded by PLIPEDO.15: 8 residues within 4Å:- Chain A: G.411, A.412, P.426, F.427, G.428, R.437
- Chain B: A.450, T.452
Ligand excluded by PLIPEDO.16: 9 residues within 4Å:- Chain A: K.88, F.134, W.137, Q.138, R.141, C.264, I.265, S.421
- Ligands: NDP.1
Ligand excluded by PLIPEDO.17: 5 residues within 4Å:- Chain A: R.42, F.46, R.49, P.122, A.149
Ligand excluded by PLIPEDO.19: 10 residues within 4Å:- Chain B: I.5, K.156, H.157, A.158, S.159, P.162, A.165, L.185, L.186, I.187
Ligand excluded by PLIPEDO.20: 2 residues within 4Å:- Chain B: R.50, E.98
Ligand excluded by PLIPEDO.21: 8 residues within 4Å:- Chain B: E.169, L.172, E.173, F.177, P.178, G.180, V.181, F.182
Ligand excluded by PLIPEDO.22: 2 residues within 4Å:- Chain B: P.24, Q.194
Ligand excluded by PLIPEDO.23: 5 residues within 4Å:- Chain B: L.312, R.338, A.339, G.340, Y.341
Ligand excluded by PLIPEDO.24: 6 residues within 4Å:- Chain B: D.314, I.315, Q.318, E.361, L.362, F.363
Ligand excluded by PLIPEDO.25: 4 residues within 4Å:- Chain B: A.40, Y.41, T.44, P.178
Ligand excluded by PLIPEDO.26: 3 residues within 4Å:- Chain B: S.290, L.291, D.302
Ligand excluded by PLIPEDO.27: 3 residues within 4Å:- Chain B: G.188, A.189, S.190
Ligand excluded by PLIPEDO.28: 6 residues within 4Å:- Chain A: L.123, N.449
- Chain B: D.409, A.410, T.430, K.431
Ligand excluded by PLIPEDO.29: 10 residues within 4Å:- Chain B: K.88, F.134, W.137, Q.138, R.141, C.264, I.265, S.421
- Ligands: NDP.18, EDO.35
Ligand excluded by PLIPEDO.30: 5 residues within 4Å:- Chain B: Q.321, A.322, A.355, K.356, I.357
Ligand excluded by PLIPEDO.31: 9 residues within 4Å:- Chain B: P.145, A.146, N.151, G.443, I.444, R.445, T.446, F.447, V.448
Ligand excluded by PLIPEDO.32: 8 residues within 4Å:- Chain B: S.209, E.210, P.211, L.231, G.232, E.361, F.387
- Ligands: NDP.18
Ligand excluded by PLIPEDO.33: 2 residues within 4Å:- Chain B: D.374, D.376
Ligand excluded by PLIPEDO.34: 2 residues within 4Å:- Chain A: P.211
- Chain B: Q.222
Ligand excluded by PLIPEDO.35: 5 residues within 4Å:- Chain B: E.85, K.88, F.134, W.137
- Ligands: EDO.29
Ligand excluded by PLIPEDO.36: 8 residues within 4Å:- Chain A: A.450, T.452
- Chain B: G.411, A.412, P.426, F.427, G.428, R.437
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Park, J. et al., Structural Basis for a Cofactor-dependent Oxidation Protection and Catalysis of Cyanobacterial Succinic Semialdehyde Dehydrogenase. J.Biol.Chem. (2013)
- Release Date
- 2013-04-24
- Peptides
- Succinate-semialdehyde dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 34 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Park, J. et al., Structural Basis for a Cofactor-dependent Oxidation Protection and Catalysis of Cyanobacterial Succinic Semialdehyde Dehydrogenase. J.Biol.Chem. (2013)
- Release Date
- 2013-04-24
- Peptides
- Succinate-semialdehyde dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B