SMTL ID : 4ix2.2 (1 other biounit)

Inosine 5'-monophosphate dehydrogenase from Vibrio cholerae, deletion mutant, complexed with IMP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-tetramer

Ligands

4 x IMP: INOSINIC ACID(Non-covalent)

IMP.1: 17 residues within 4Å: Chain A: A.52, M.54, N.156, G.181, S.182, I.183, D.217, G.218, G.219, M.238, V.239, G.240, S.241, Y.264, G.266, M.267, E.294 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:N.156, A:S.182, A:D.217, A:G.219, A:G.240, A:S.241, A:S.241, A:Y.264, A:M.267, A:E.294, A:E.294 Water bridges: A:K.175, A:K.175, A:G.181, A:G.218, A:G.218, A:S.241, A:S.241, A:M.242, A:G.295 IMP.3: 19 residues within 4Å: Chain B: A.52, M.54, N.156, G.181, S.182, I.183, C.184, T.186, D.217, G.218, G.219, M.238, V.239, G.240, S.241, Y.264, G.266, M.267, E.294 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:N.156, B:D.217, B:G.219, B:G.240, B:S.241, B:S.241, B:S.241, B:Y.264, B:M.267, B:E.294 Water bridges: B:G.181, B:D.217, B:D.217 IMP.5: 17 residues within 4Å: Chain C: A.52, M.54, N.156, G.181, S.182, I.183, D.217, G.218, G.219, M.238, V.239, G.240, S.241, Y.264, G.266, M.267, E.294 20 PLIP interactions: 20 interactions with chain C Hydrogen bonds: C:N.156, C:S.182, C:D.217, C:G.219, C:G.240, C:S.241, C:S.241, C:Y.264, C:M.267, C:E.294, C:E.294 Water bridges: C:K.175, C:K.175, C:G.181, C:G.218, C:G.218, C:S.241, C:S.241, C:M.242, C:G.295 IMP.7: 19 residues within 4Å: Chain D: A.52, M.54, N.156, G.181, S.182, I.183, C.184, T.186, D.217, G.218, G.219, M.238, V.239, G.240, S.241, Y.264, G.266, M.267, E.294 13 PLIP interactions: 13 interactions with chain D Hydrogen bonds: D:N.156, D:D.217, D:G.219, D:G.240, D:S.241, D:S.241, D:S.241, D:Y.264, D:M.267, D:E.294 Water bridges: D:G.181, D:D.217, D:D.217

4 x K: POTASSIUM ION(Non-covalent)

K.2: 8 residues within 4Å: Chain A: G.179, P.180, G.181, C.184 Chain B: E.348, S.349, H.350, H.352 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Metal complexes: A:G.179, A:C.184, B:E.348, B:S.349, B:H.350 K.4: 7 residues within 4Å: Chain B: G.179, P.180, G.181, C.184 Chain C: E.348, S.349, H.350 5 PLIP interactions: 2 interactions with chain C, 3 interactions with chain B Metal complexes: C:E.348, C:S.349, B:G.179, B:G.181, B:C.184 K.6: 8 residues within 4Å: Chain C: G.179, P.180, G.181, C.184 Chain D: E.348, S.349, H.350, H.352 5 PLIP interactions: 3 interactions with chain D, 2 interactions with chain C Metal complexes: D:E.348, D:S.349, D:H.350, C:G.179, C:C.184 K.8: 7 residues within 4Å: Chain A: E.348, S.349, H.350 Chain D: G.179, P.180, G.181, C.184 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain D Metal complexes: A:E.348, A:S.349, D:G.179, D:G.181, D:C.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osipiuk, J. et al., Inosine 5'-monophosphate dehydrogenase from Vibrio cholerae, deletion mutant, complexed with IMP. To be Published

Release Date

2013-02-06

Peptides

Inosine-5'-monophosphate dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
B

D
C

Inosine-5'-monophosphate dehydrogenase

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