SMTL ID : 4jqp.1

X-ray crystal structure of a 4-hydroxythreonine-4-phosphate dehydrogenase from Burkholderia phymatum

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.180, H.280 Chain B: H.224 6 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: B:H.224, A:H.180, A:H.280, H2O.6, H2O.8, H2O.10 ZN.4: 3 residues within 4Å: Chain A: H.224 Chain B: H.180, H.280 6 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: B:H.180, B:H.280, A:H.224, H2O.8, H2O.18, H2O.22

2 x MG: MAGNESIUM ION(Non-functional Binders)

MG.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 3 residues within 4Å: Chain A: T.178, T.179, K.189 No protein-ligand interaction detected (PLIP) CA.6: 4 residues within 4Å: Chain B: T.178, T.179, I.181, K.189 No protein-ligand interaction detected (PLIP)

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.7: 8 residues within 4Å: Chain B: A.204, T.205, K.208, V.300, G.301, L.302, V.304, I.305 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.301 Water bridges: B:T.299, B:V.304

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fairman, J.W. et al., X-ray crystal structure of a 4-hydroxythreonine-4-phosphate dehydrogenase from Burkholderia phymatum. TO BE PUBLISHED

Release Date

2013-04-17

Peptides

4-hydroxythreonine-4-phosphate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

4-hydroxythreonine-4-phosphate dehydrogenase