SMTL ID : 4jtj.1

Crystal structure of R117K mutant of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-tetramer

Ligands

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: E.150, K.151, E.154 Chain C: S.62, I.63 Ligand excluded by PLIP CL.2: 6 residues within 4Å: Chain C: K.52, Q.110, K.135, H.199, F.234, E.236 Ligand excluded by PLIP CL.4: 6 residues within 4Å: Chain D: K.52, Q.110, K.135, H.199, F.234, E.236 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 3 residues within 4Å: Chain C: A.103, C.106, N.130 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:A.103, C:N.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Allison, T.M. et al., Examining the Role of Intersubunit Contacts in Catalysis by 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthase. Biochemistry (2013)

Release Date

2013-06-26

Peptides

2-dehydro-3-deoxyphosphooctonate aldolase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

2-dehydro-3-deoxyphosphooctonate aldolase