SMTL ID : 4k4s.1 (1 other biounit)

Poliovirus polymerase elongation complex (r3_form)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x G- G- A- G: RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')(Non-covalent)

G-G-A-G.1: 7 residues within 4Å: Chain A: I.16, N.18, G.124 Chain B: U.6, C.7, C.8, A.9 Protein-ligand interaction information (PLIP) not available

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: H.270, H.272, C.281 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.270, A:H.272, A:C.281

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: D.233, Y.234, T.235, T.355 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.233, A:T.355 GOL.4: 5 residues within 4Å: Chain A: D.233, D.329, V.330, D.358, T.372 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.330, A:V.330 GOL.5: 5 residues within 4Å: Chain A: Y.313, I.316, Y.334, H.336, E.337 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.336, A:E.337

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gong, P. et al., Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One (2013)

Release Date

2013-05-22

Peptides

RNA-directed RNA polymerase 3D-POL: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-directed RNA polymerase 3D-POL

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