SMTL ID : 4kdf.2 (1 other biounit)

Crystal Structure of Thermus thermophilus Malate Dehydrogenase in Complex with NAD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.36 Å

Oligo State

homo-dimer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.162, H.187, G.226, S.237 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.226 Salt bridges: A:R.162, A:H.187 SO4.2: 3 residues within 4Å: Chain A: F.302, K.305, R.306 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.305, A:R.306 SO4.3: 3 residues within 4Å: Chain A: G.31, K.32, R.250 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.32 Salt bridges: A:R.250 SO4.4: 4 residues within 4Å: Chain B: R.162, H.187, G.226, S.237 3 PLIP interactions: 3 interactions with chain B Water bridges: B:R.162 Salt bridges: B:R.162, B:H.187 SO4.5: 4 residues within 4Å: Chain B: G.27, G.31, K.32, R.250 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.32 Salt bridges: B:K.32, B:R.250

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hung, C.H. et al., Crystal structures and molecular dynamics simulations of thermophilic malate dehydrogenase reveal critical loop motion for co-substrate binding. Plos One (2013)

Release Date

2014-02-05

Peptides

Malate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Malate dehydrogenase

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