SMTL ID : 4l1l.1

Rat PKC C2 domain bound to CD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.85, F.107, G.108, E.111, N.133 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.108, A:N.133 Water bridges: A:R.85, A:R.85, A:N.133, A:N.133 Salt bridges: A:R.85 SO4.2: 4 residues within 4Å: Chain A: K.43, K.45, N.52, K.55 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.52 Water bridges: A:K.55, A:K.55 Salt bridges: A:K.43, A:K.45, A:K.55 SO4.3: 4 residues within 4Å: Chain A: Y.41, K.43, K.55, K.57 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.41 Water bridges: A:K.55, A:K.55, A:N.99, A:N.99 Salt bridges: A:K.43, A:K.55, A:K.57 SO4.4: 2 residues within 4Å: Chain A: K.18, K.76 4 PLIP interactions: 4 interactions with chain A Water bridges: A:K.18, A:K.76 Salt bridges: A:K.18, A:K.76 SO4.5: 6 residues within 4Å: Chain A: D.33, P.34, D.94, R.95, T.96, T.97 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.95, A:T.96, A:T.96, A:T.96, A:T.97 Water bridges: A:D.33, A:D.94

6 x CD: CADMIUM ION(Non-covalent)

CD.6: 6 residues within 4Å: Chain A: D.33, D.39, D.92, W.93, D.94 Ligands: CD.7 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.33, A:D.92, A:W.93, A:D.94, H2O.1 CD.7: 6 residues within 4Å: Chain A: M.32, D.33, D.92, D.94, D.100 Ligands: CD.6 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:M.32, A:D.33, A:D.92, A:D.100, H2O.2 CD.8: 4 residues within 4Å: Chain A: D.94, T.97, R.98, D.100 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.94, A:T.97, A:R.98, A:D.100 CD.9: 3 residues within 4Å: Chain A: D.33, D.39, S.63 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.39, A:D.39, H2O.1, H2O.1, H2O.5 CD.10: 4 residues within 4Å: Chain A: T.2, E.3, N.125, E.128 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.3, A:E.128, A:E.128, H2O.6, H2O.6 CD.11: 1 residues within 4Å: Chain A: E.111 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.111, A:E.111, H2O.1, H2O.4, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Morales, K.A. et al., Cd(2+) as a ca(2+) surrogate in protein-membrane interactions: isostructural but not isofunctional. J.Am.Chem.Soc. (2013)

Release Date

2013-08-28

Peptides

Protein kinase C alpha type: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein kinase C alpha type

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