SMTL ID : 4l89.1

Crystal structure of a GNAT superfamily acetyltransferase PA4794 in complex with covalently bound CoA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.34, R.143, H.144 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.144 Salt bridges: A:K.34, A:H.144 SO4.2: 2 residues within 4Å: Chain A: R.52, G.53 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.53 Water bridges: A:S.54 Salt bridges: A:R.52

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: Q.71, W.72, Q.73 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.72, A:Q.73 EDO.4: 4 residues within 4Å: Chain A: R.25, A.35, I.36, W.37 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.37 EDO.5: 5 residues within 4Å: Chain A: R.25, D.26, F.29, D.145, V.151 No protein-ligand interaction detected (PLIP) EDO.6: 4 residues within 4Å: Chain A: T.12, G.13, L.15, E.16 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.15, A:E.16 EDO.7: 3 residues within 4Å: Chain A: A.141, R.143, Q.155 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.143, A:R.143, A:Q.155 Water bridges: A:E.142, A:E.142 EDO.8: 2 residues within 4Å: Chain A: R.52, W.72 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.52, A:R.52 EDO.9: 2 residues within 4Å: Chain A: Q.136, R.138 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.136, A:Q.136, A:R.138, A:R.138

1 x COA: COENZYME A(Non-covalent)

COA.10: 19 residues within 4Å: Chain A: E.27, Y.30, C.31, M.83, M.84, V.85, R.90, G.91, L.92, G.93, V.94, A.95, R.96, N.123, A.125, L.128, L.129, Y.130, Q.132 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:A.95 Hydrogen bonds: A:M.83, A:V.85, A:R.90, A:G.91, A:G.93, A:G.93, A:V.94, A:A.95, A:R.96, A:N.123, A:L.128, A:Q.132 Water bridges: A:L.92, A:L.92, A:R.96 Salt bridges: A:R.96, A:R.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Majorek, K.A. et al., Structural, functional, and inhibition studies of a Gcn5-related N-acetyltransferase (GNAT) superfamily protein PA4794: a new C-terminal lysine protein acetyltransferase from pseudomonas aeruginosa. J.Biol.Chem. (2013)

Release Date

2013-07-10

Peptides

Uncharacterized protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uncharacterized protein

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