SMTL ID : 4m0l.2 (5 other biounits)

Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus complexed with GDP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 16 residues within 4Å: Chain A: H.17, V.18, D.19, H.20, G.21, K.22, T.23, T.24, N.149, K.150, D.152, V.153, S.184, A.185, L.186 Ligands: MG.2 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:D.19, A:H.20, A:G.21, A:K.22, A:T.23, A:T.24, A:T.24, A:N.149, A:K.150, A:K.150, A:S.184, A:A.185, A:L.186 Water bridges: A:T.23 Salt bridges: A:K.22, A:D.152

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: T.23 Ligands: GDP.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.23, H2O.1, H2O.1, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nikonov, O. et al., Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2. Acta Crystallogr.,Sect.D (2014)

Release Date

2013-08-28

Peptides

Translation initiation factor 2 subunit gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Translation initiation factor 2 subunit gamma

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