SMTL ID : 4m9u.1

The crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit of Francisella tularensis subsp. tularensis SCHU S4

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

4 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: E.37, V.40 Ligands: NA.15 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.40, A:V.40 NA.2: 3 residues within 4Å: Chain A: S.95, E.101, I.260 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.101, A:I.260 NA.15: 3 residues within 4Å: Chain B: E.37, V.40 Ligands: NA.1 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:V.40, B:V.40 NA.16: 3 residues within 4Å: Chain B: S.95, E.101, I.260 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:I.260, B:I.260

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: D.34, C.35, K.328 Ligand excluded by PLIP CL.17: 3 residues within 4Å: Chain B: D.34, C.35, K.328 Ligand excluded by PLIP

20 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 4 residues within 4Å: Chain A: A.18, I.272, S.278, F.280 Ligand excluded by PLIP ACT.5: 3 residues within 4Å: Chain A: Q.149, F.150, V.151 Ligand excluded by PLIP ACT.6: 1 residues within 4Å: Chain A: K.2 Ligand excluded by PLIP ACT.7: 5 residues within 4Å: Chain A: G.30, K.31, N.32, V.43, D.45 Ligand excluded by PLIP ACT.8: 3 residues within 4Å: Chain A: I.110, A.111, L.255 Ligand excluded by PLIP ACT.9: 3 residues within 4Å: Chain A: T.312 Chain B: M.1, L.24 Ligand excluded by PLIP ACT.10: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP ACT.11: 5 residues within 4Å: Chain A: M.309, K.328, E.329, P.330, V.336 Ligand excluded by PLIP ACT.12: 6 residues within 4Å: Chain A: R.298 Chain B: G.274, V.276, T.296, S.297, R.298 Ligand excluded by PLIP ACT.13: 4 residues within 4Å: Chain A: N.80, V.85, S.88, A.89 Ligand excluded by PLIP ACT.18: 4 residues within 4Å: Chain B: A.18, I.272, S.278, F.280 Ligand excluded by PLIP ACT.19: 3 residues within 4Å: Chain B: Q.149, F.150, V.151 Ligand excluded by PLIP ACT.20: 1 residues within 4Å: Chain B: K.2 Ligand excluded by PLIP ACT.21: 5 residues within 4Å: Chain B: G.30, K.31, N.32, V.43, D.45 Ligand excluded by PLIP ACT.22: 3 residues within 4Å: Chain B: I.110, A.111, L.255 Ligand excluded by PLIP ACT.23: 3 residues within 4Å: Chain A: M.1, L.24 Chain B: T.312 Ligand excluded by PLIP ACT.24: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP ACT.25: 5 residues within 4Å: Chain B: M.309, K.328, E.329, P.330, V.336 Ligand excluded by PLIP ACT.26: 6 residues within 4Å: Chain A: G.274, V.276, T.296, S.297, R.298 Chain B: R.298 Ligand excluded by PLIP ACT.27: 4 residues within 4Å: Chain B: N.80, V.85, S.88, A.89 Ligand excluded by PLIP

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.14: 2 residues within 4Å: Chain A: R.331, R.334 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.334 Water bridges: A:G.333 FMT.28: 2 residues within 4Å: Chain B: R.331, R.334 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.334 Water bridges: B:G.333

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., The crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit of Francisella tularensis subsp. tularensis SCHU S4. To be Published

Release Date

2013-08-28

Peptides

Phosphoribosylaminoimidazole carboxylase, ATPase subunit: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Phosphoribosylaminoimidazole carboxylase, ATPase subunit