SMTL ID : 4muy.2 (1 other biounit)

IspH in complex with pyridin-4-ylmethyl diphosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x F3S: FE3-S4 CLUSTER(Non-covalent)

F3S.1: 10 residues within 4Å: Chain A: C.24, G.26, V.27, C.108, L.110, T.179, C.209, Y.210, A.280 Ligands: 2E5.2 3 PLIP interactions: 3 interactions with chain A, Metal complexes: A:C.24, A:C.108, A:C.209

1 x 2E5: pyridin-4-ylmethyl trihydrogen diphosphate(Non-covalent)

2E5.2: 16 residues within 4Å: Chain A: V.27, V.52, H.53, A.85, H.86, V.111, H.136, E.138, T.179, T.180, N.236, S.237, S.238, N.239, S.281 Ligands: F3S.1 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:A.85, A:T.180 Hydrogen bonds: A:H.53, A:T.180, A:T.180, A:S.238, A:N.239, A:N.239, A:S.281 Water bridges: A:T.179 Salt bridges: A:H.53, A:H.53, A:H.86, A:H.86, A:H.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Span, I. et al., Insights into the Binding of Pyridines to the Iron-Sulfur Enzyme IspH. J.Am.Chem.Soc. (2014)

Release Date

2014-06-11

Peptides

4-hydroxy-3-methylbut-2-enyl diphosphate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

4-hydroxy-3-methylbut-2-enyl diphosphate reductase

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