SMTL ID : 4n9z.1 (1 other biounit)

Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E749Q

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x V3L: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate)(Non-covalent)

V3L.1: 8 residues within 4Å: Chain A: P.32, V.38, V.40, R.41, V.42, D.43, F.54, T.56 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:V.38, A:R.41, A:V.42, A:D.43, A:T.56 Water bridges: A:Q.166 Salt bridges: A:R.41 pi-Stacking: A:F.54, A:F.54

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: R.387 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.387 Salt bridges: A:R.387 SO4.3: 5 residues within 4Å: Chain A: R.91, Y.120, P.199, R.200, N.202 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.120, A:R.200, A:N.202 Water bridges: A:R.91, A:R.91, A:R.200, A:A.203 Salt bridges: A:R.91 SO4.4: 3 residues within 4Å: Chain A: P.28, S.29, R.31 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.29 Water bridges: A:R.31 Salt bridges: A:R.31 SO4.5: 5 residues within 4Å: Chain A: R.219, G.302, G.305, A.306, G.307 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.306, A:G.307 Salt bridges: A:R.219 SO4.6: 3 residues within 4Å: Chain A: R.200, S.207, E.208 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.200, A:S.207, A:E.208 Water bridges: A:Y.209

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Z. et al., Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase. Plos One (2014)

Release Date

2014-01-29

Peptides

Poly(ADP-ribose) glycohydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Poly(ADP-ribose) glycohydrolase

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